Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot54 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot54.fna.gz | LjRoot54.faa.gz | LjRoot54.ffn.gz | LjRoot54.gff.gz |
LjRoot59 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot59.fna.gz | LjRoot59.faa.gz | LjRoot59.ffn.gz | LjRoot59.gff.gz |
LjRoot71 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot71.fna.gz | LjRoot71.faa.gz | LjRoot71.ffn.gz | LjRoot71.gff.gz |
LjRoot92 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot92.fna.gz | LjRoot92.faa.gz | LjRoot92.ffn.gz | LjRoot92.gff.gz |
LjRoot111 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot111.fna.gz | LjRoot111.faa.gz | LjRoot111.ffn.gz | LjRoot111.gff.gz |
LjRoot147 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot147.fna.gz | LjRoot147.faa.gz | LjRoot147.ffn.gz | LjRoot147.gff.gz |
LjRoot151 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot151.fna.gz | LjRoot151.faa.gz | LjRoot151.ffn.gz | LjRoot151.gff.gz |
LjRoot152 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot152.fna.gz | LjRoot152.faa.gz | LjRoot152.ffn.gz | LjRoot152.gff.gz |
LjRoot154 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot154.fna.gz | LjRoot154.faa.gz | LjRoot154.ffn.gz | LjRoot154.gff.gz |
LjRoot159 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot159.fna.gz | LjRoot159.faa.gz | LjRoot159.ffn.gz | LjRoot159.gff.gz |
LjRoot162 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot162.fna.gz | LjRoot162.faa.gz | LjRoot162.ffn.gz | LjRoot162.gff.gz |
LjRoot182 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot182.fna.gz | LjRoot182.faa.gz | LjRoot182.ffn.gz | LjRoot182.gff.gz |
LjRoot195 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot195.fna.gz | LjRoot195.faa.gz | LjRoot195.ffn.gz | LjRoot195.gff.gz |
LjRoot232 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot232.fna.gz | LjRoot232.faa.gz | LjRoot232.ffn.gz | LjRoot232.gff.gz |
LjRoot250 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot250.fna.gz | LjRoot250.faa.gz | LjRoot250.ffn.gz | LjRoot250.gff.gz |
LjRoot252 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot252.fna.gz | LjRoot252.faa.gz | LjRoot252.ffn.gz | LjRoot252.gff.gz |
LjRoot263 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot263.fna.gz | LjRoot263.faa.gz | LjRoot263.ffn.gz | LjRoot263.gff.gz |
LjRoot264 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot264.fna.gz | LjRoot264.faa.gz | LjRoot264.ffn.gz | LjRoot264.gff.gz |
LjRoot268 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot268.fna.gz | LjRoot268.faa.gz | LjRoot268.ffn.gz | LjRoot268.gff.gz |
LjRoot277 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot277.fna.gz | LjRoot277.faa.gz | LjRoot277.ffn.gz | LjRoot277.gff.gz |