Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjNodule218 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule218.fna.gz | LjNodule218.faa.gz | LjNodule218.ffn.gz | LjNodule218.gff.gz |
Leaf3 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Leaf | Leaf3.fna.gz | Leaf3.faa.gz | Leaf3.ffn.gz | Leaf3.gff.gz |
Root22 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Root | Root22.fna.gz | Root22.faa.gz | Root22.ffn.gz | Root22.gff.gz |
Root918 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Root | Root918.fna.gz | Root918.faa.gz | Root918.ffn.gz | Root918.gff.gz |
Root9 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root9.fna.gz | Root9.faa.gz | Root9.ffn.gz | Root9.gff.gz |
Leaf15 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf15.fna.gz | Leaf15.faa.gz | Leaf15.ffn.gz | Leaf15.gff.gz |
Leaf48 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf48.fna.gz | Leaf48.faa.gz | Leaf48.ffn.gz | Leaf48.gff.gz |
Leaf58 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf58.fna.gz | Leaf58.faa.gz | Leaf58.ffn.gz | Leaf58.gff.gz |
Leaf83 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf83.fna.gz | Leaf83.faa.gz | Leaf83.ffn.gz | Leaf83.gff.gz |
Root68 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root68.fna.gz | Root68.faa.gz | Root68.ffn.gz | Root68.gff.gz |
Root71 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root71.fna.gz | Root71.faa.gz | Root71.ffn.gz | Root71.gff.gz |
Leaf127 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf127.fna.gz | Leaf127.faa.gz | Leaf127.ffn.gz | Leaf127.gff.gz |
Leaf129 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf129.fna.gz | Leaf129.faa.gz | Leaf129.ffn.gz | Leaf129.gff.gz |
Leaf434 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf434.fna.gz | Leaf434.faa.gz | Leaf434.ffn.gz | Leaf434.gff.gz |
LjRoot6 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot6.fna.gz | LjRoot6.faa.gz | LjRoot6.ffn.gz | LjRoot6.gff.gz |
Root329 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root329.fna.gz | Root329.faa.gz | Root329.ffn.gz | Root329.gff.gz |
Root401 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root401.fna.gz | Root401.faa.gz | Root401.ffn.gz | Root401.gff.gz |
Root562 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root562.fna.gz | Root562.faa.gz | Root562.ffn.gz | Root562.gff.gz |
Root569 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root569.fna.gz | Root569.faa.gz | Root569.ffn.gz | Root569.gff.gz |
LjRoot43 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot43.fna.gz | LjRoot43.faa.gz | LjRoot43.ffn.gz | LjRoot43.gff.gz |