Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot245 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot245.fna.gz | LjRoot245.faa.gz | LjRoot245.ffn.gz | LjRoot245.gff.gz |
LjRoot248 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot248.fna.gz | LjRoot248.faa.gz | LjRoot248.ffn.gz | LjRoot248.gff.gz |
LjRoot251 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot251.fna.gz | LjRoot251.faa.gz | LjRoot251.ffn.gz | LjRoot251.gff.gz |
LjRoot254 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot254.fna.gz | LjRoot254.faa.gz | LjRoot254.ffn.gz | LjRoot254.gff.gz |
LjRoot255 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot255.fna.gz | LjRoot255.faa.gz | LjRoot255.ffn.gz | LjRoot255.gff.gz |
LjRoot257 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot257.fna.gz | LjRoot257.faa.gz | LjRoot257.ffn.gz | LjRoot257.gff.gz |
LjRoot258 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot258.fna.gz | LjRoot258.faa.gz | LjRoot258.ffn.gz | LjRoot258.gff.gz |
LjRoot265 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot265.fna.gz | LjRoot265.faa.gz | LjRoot265.ffn.gz | LjRoot265.gff.gz |
LjRoot273 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot273.fna.gz | LjRoot273.faa.gz | LjRoot273.ffn.gz | LjRoot273.gff.gz |
LjRoot274 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot274.fna.gz | LjRoot274.faa.gz | LjRoot274.ffn.gz | LjRoot274.gff.gz |
Root483D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root483D2.fna.gz | Root483D2.faa.gz | Root483D2.ffn.gz | Root483D2.gff.gz |
Root9 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root9.fna.gz | Root9.faa.gz | Root9.ffn.gz | Root9.gff.gz |
Leaf15 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf15.fna.gz | Leaf15.faa.gz | Leaf15.ffn.gz | Leaf15.gff.gz |
Leaf48 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf48.fna.gz | Leaf48.faa.gz | Leaf48.ffn.gz | Leaf48.gff.gz |
Leaf58 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf58.fna.gz | Leaf58.faa.gz | Leaf58.ffn.gz | Leaf58.gff.gz |
Leaf83 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf83.fna.gz | Leaf83.faa.gz | Leaf83.ffn.gz | Leaf83.gff.gz |
Root68 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root68.fna.gz | Root68.faa.gz | Root68.ffn.gz | Root68.gff.gz |
Root71 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Root | Root71.fna.gz | Root71.faa.gz | Root71.ffn.gz | Root71.gff.gz |
Leaf127 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf127.fna.gz | Leaf127.faa.gz | Leaf127.ffn.gz | Leaf127.gff.gz |
Leaf129 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf129.fna.gz | Leaf129.faa.gz | Leaf129.ffn.gz | Leaf129.gff.gz |