| Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| LjRoot232 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot232.fna.gz | LjRoot232.faa.gz | LjRoot232.ffn.gz | LjRoot232.gff.gz |
| LjRoot250 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot250.fna.gz | LjRoot250.faa.gz | LjRoot250.ffn.gz | LjRoot250.gff.gz |
| LjRoot252 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot252.fna.gz | LjRoot252.faa.gz | LjRoot252.ffn.gz | LjRoot252.gff.gz |
| LjRoot263 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot263.fna.gz | LjRoot263.faa.gz | LjRoot263.ffn.gz | LjRoot263.gff.gz |
| LjRoot264 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot264.fna.gz | LjRoot264.faa.gz | LjRoot264.ffn.gz | LjRoot264.gff.gz |
| LjRoot268 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot268.fna.gz | LjRoot268.faa.gz | LjRoot268.ffn.gz | LjRoot268.gff.gz |
| LjRoot277 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot277.fna.gz | LjRoot277.faa.gz | LjRoot277.ffn.gz | LjRoot277.gff.gz |
| LjRoot279 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot279.fna.gz | LjRoot279.faa.gz | LjRoot279.ffn.gz | LjRoot279.gff.gz |
| LjRoot281 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot281.fna.gz | LjRoot281.faa.gz | LjRoot281.ffn.gz | LjRoot281.gff.gz |
| LjRoot286 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot286.fna.gz | LjRoot286.faa.gz | LjRoot286.ffn.gz | LjRoot286.gff.gz |
| Leaf3 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Leaf | Leaf3.fna.gz | Leaf3.faa.gz | Leaf3.ffn.gz | Leaf3.gff.gz |
| Root22 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Root | Root22.fna.gz | Root22.faa.gz | Root22.ffn.gz | Root22.gff.gz |
| Root918 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Root | Root918.fna.gz | Root918.faa.gz | Root918.ffn.gz | Root918.gff.gz |
| LjRoot7 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot7.fna.gz | LjRoot7.faa.gz | LjRoot7.ffn.gz | LjRoot7.gff.gz |
| Root100 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root100.fna.gz | Root100.faa.gz | Root100.ffn.gz | Root100.gff.gz |
| Root102 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root102.fna.gz | Root102.faa.gz | Root102.ffn.gz | Root102.gff.gz |
| Root157 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root157.fna.gz | Root157.faa.gz | Root157.ffn.gz | Root157.gff.gz |
| Root172 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root172.fna.gz | Root172.faa.gz | Root172.ffn.gz | Root172.gff.gz |
| Root552 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root552.fna.gz | Root552.faa.gz | Root552.ffn.gz | Root552.gff.gz |
| Root554 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root554.fna.gz | Root554.faa.gz | Root554.ffn.gz | Root554.gff.gz |
| Root695 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root695.fna.gz | Root695.faa.gz | Root695.ffn.gz | Root695.gff.gz |
| Root1471 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root1471.fna.gz | Root1471.faa.gz | Root1471.ffn.gz | Root1471.gff.gz |
| LjRoot228 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot228.fna.gz | LjRoot228.faa.gz | LjRoot228.ffn.gz | LjRoot228.gff.gz |
| LjRoot231 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot231.fna.gz | LjRoot231.faa.gz | LjRoot231.ffn.gz | LjRoot231.gff.gz |
| LjRoot234 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot234.fna.gz | LjRoot234.faa.gz | LjRoot234.ffn.gz | LjRoot234.gff.gz |
| LjRoot244 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot244.fna.gz | LjRoot244.faa.gz | LjRoot244.ffn.gz | LjRoot244.gff.gz |
| LjRoot246 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot246.fna.gz | LjRoot246.faa.gz | LjRoot246.ffn.gz | LjRoot246.gff.gz |
| LjNodule209 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule209.fna.gz | LjNodule209.faa.gz | LjNodule209.ffn.gz | LjNodule209.gff.gz |
| LjNodule210 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule210.fna.gz | LjNodule210.faa.gz | LjNodule210.ffn.gz | LjNodule210.gff.gz |
| LjNodule211 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule211.fna.gz | LjNodule211.faa.gz | LjNodule211.ffn.gz | LjNodule211.gff.gz |
| LjNodule212 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule212.fna.gz | LjNodule212.faa.gz | LjNodule212.ffn.gz | LjNodule212.gff.gz |
| LjNodule213 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule213.fna.gz | LjNodule213.faa.gz | LjNodule213.ffn.gz | LjNodule213.gff.gz |
| LjNodule214 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule214.fna.gz | LjNodule214.faa.gz | LjNodule214.ffn.gz | LjNodule214.gff.gz |
| LjNodule215 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule215.fna.gz | LjNodule215.faa.gz | LjNodule215.ffn.gz | LjNodule215.gff.gz |
| LjNodule217 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule217.fna.gz | LjNodule217.faa.gz | LjNodule217.ffn.gz | LjNodule217.gff.gz |
| LjNodule218 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule218.fna.gz | LjNodule218.faa.gz | LjNodule218.ffn.gz | LjNodule218.gff.gz |
| Leaf72 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Leaf | Leaf72.fna.gz | Leaf72.faa.gz | Leaf72.ffn.gz | Leaf72.gff.gz |
| Root52 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Root | Root52.fna.gz | Root52.faa.gz | Root52.ffn.gz | Root52.gff.gz |
| Leaf182 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Leaf | Leaf182.fna.gz | Leaf182.faa.gz | Leaf182.ffn.gz | Leaf182.gff.gz |
| Soil522 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Soil | Soil | Soil522.fna.gz | Soil522.faa.gz | Soil522.ffn.gz | Soil522.gff.gz |
| Soil750 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Soil | Soil | Soil750.fna.gz | Soil750.faa.gz | Soil750.ffn.gz | Soil750.gff.gz |
| Soil766 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Soil | Soil | Soil766.fna.gz | Soil766.faa.gz | Soil766.ffn.gz | Soil766.gff.gz |
| Soil787 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Soil | Soil | Soil787.fna.gz | Soil787.faa.gz | Soil787.ffn.gz | Soil787.gff.gz |
| LjRoot153 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Lotus japonicus | Root | LjRoot153.fna.gz | LjRoot153.faa.gz | LjRoot153.ffn.gz | LjRoot153.gff.gz |
| Root444D2 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Root | Root444D2.fna.gz | Root444D2.faa.gz | Root444D2.ffn.gz | Root444D2.gff.gz |
| Soil724D2 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Soil | Soil | Soil724D2.fna.gz | Soil724D2.faa.gz | Soil724D2.ffn.gz | Soil724D2.gff.gz |
| Leaf61 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Leaf | Leaf61.fna.gz | Leaf61.faa.gz | Leaf61.ffn.gz | Leaf61.gff.gz |
| Leaf126 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Leaf | Leaf126.fna.gz | Leaf126.faa.gz | Leaf126.ffn.gz | Leaf126.gff.gz |
| Leaf139 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Leaf | Leaf139.fna.gz | Leaf139.faa.gz | Leaf139.ffn.gz | Leaf139.gff.gz |
| Root133 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root133.fna.gz | Root133.faa.gz | Root133.ffn.gz | Root133.gff.gz |