Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot157 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot157.fna.gz | LjRoot157.faa.gz | LjRoot157.ffn.gz | LjRoot157.gff.gz |
LjRoot165 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot165.fna.gz | LjRoot165.faa.gz | LjRoot165.ffn.gz | LjRoot165.gff.gz |
LjRoot173 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot173.fna.gz | LjRoot173.faa.gz | LjRoot173.ffn.gz | LjRoot173.gff.gz |
LjRoot193 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot193.fna.gz | LjRoot193.faa.gz | LjRoot193.ffn.gz | LjRoot193.gff.gz |
LjRoot197 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot197.fna.gz | LjRoot197.faa.gz | LjRoot197.ffn.gz | LjRoot197.gff.gz |
LjRoot247 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot247.fna.gz | LjRoot247.faa.gz | LjRoot247.ffn.gz | LjRoot247.gff.gz |
LjRoot298 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot298.fna.gz | LjRoot298.faa.gz | LjRoot298.ffn.gz | LjRoot298.gff.gz |
Root55 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Arabidopsis thaliana | Root | Root55.fna.gz | Root55.faa.gz | Root55.ffn.gz | Root55.gff.gz |
Root63 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Arabidopsis thaliana | Root | Root63.fna.gz | Root63.faa.gz | Root63.ffn.gz | Root63.gff.gz |
Root107 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Arabidopsis thaliana | Root | Root107.fna.gz | Root107.faa.gz | Root107.ffn.gz | Root107.gff.gz |