Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot233 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot233.fna.gz | LjRoot233.faa.gz | LjRoot233.ffn.gz | LjRoot233.gff.gz |
LjRoot237 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot237.fna.gz | LjRoot237.faa.gz | LjRoot237.ffn.gz | LjRoot237.gff.gz |
LjRoot243 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot243.fna.gz | LjRoot243.faa.gz | LjRoot243.ffn.gz | LjRoot243.gff.gz |
LjRoot253 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot253.fna.gz | LjRoot253.faa.gz | LjRoot253.ffn.gz | LjRoot253.gff.gz |
LjRoot261 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot261.fna.gz | LjRoot261.faa.gz | LjRoot261.ffn.gz | LjRoot261.gff.gz |
LjRoot293 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot293.fna.gz | LjRoot293.faa.gz | LjRoot293.ffn.gz | LjRoot293.gff.gz |
LjRoot297 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot297.fna.gz | LjRoot297.faa.gz | LjRoot297.ffn.gz | LjRoot297.gff.gz |
Root123D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root123D2.fna.gz | Root123D2.faa.gz | Root123D2.ffn.gz | Root123D2.gff.gz |
Root483D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root483D1.fna.gz | Root483D1.faa.gz | Root483D1.ffn.gz | Root483D1.gff.gz |
Leaf13 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Leaf | Leaf13.fna.gz | Leaf13.faa.gz | Leaf13.ffn.gz | Leaf13.gff.gz |
Leaf49 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Leaf | Leaf49.fna.gz | Leaf49.faa.gz | Leaf49.ffn.gz | Leaf49.gff.gz |
Leaf75 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Leaf | Leaf75.fna.gz | Leaf75.faa.gz | Leaf75.ffn.gz | Leaf75.gff.gz |
Root11 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Root | Root11.fna.gz | Root11.faa.gz | Root11.ffn.gz | Root11.gff.gz |
Leaf406 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Leaf | Leaf406.fna.gz | Leaf406.faa.gz | Leaf406.ffn.gz | Leaf406.gff.gz |
LjRoot5 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot5.fna.gz | LjRoot5.faa.gz | LjRoot5.ffn.gz | LjRoot5.gff.gz |
Root131 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Root | Root131.fna.gz | Root131.faa.gz | Root131.ffn.gz | Root131.gff.gz |
Root147 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Root | Root147.fna.gz | Root147.faa.gz | Root147.ffn.gz | Root147.gff.gz |
Root239 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Root | Root239.fna.gz | Root239.faa.gz | Root239.ffn.gz | Root239.gff.gz |
Root920 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Root | Root920.fna.gz | Root920.faa.gz | Root920.ffn.gz | Root920.gff.gz |
Soil531 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Soil | Soil | Soil531.fna.gz | Soil531.faa.gz | Soil531.ffn.gz | Soil531.gff.gz |