Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot29 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot29.fna.gz | LjRoot29.faa.gz | LjRoot29.ffn.gz | LjRoot29.gff.gz |
LjRoot31 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot31.fna.gz | LjRoot31.faa.gz | LjRoot31.ffn.gz | LjRoot31.gff.gz |
LjRoot34 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot34.fna.gz | LjRoot34.faa.gz | LjRoot34.ffn.gz | LjRoot34.gff.gz |
LjRoot223 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot223.fna.gz | LjRoot223.faa.gz | LjRoot223.ffn.gz | LjRoot223.gff.gz |
LjRoot230 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot230.fna.gz | LjRoot230.faa.gz | LjRoot230.ffn.gz | LjRoot230.gff.gz |
LjRoot241 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot241.fna.gz | LjRoot241.faa.gz | LjRoot241.ffn.gz | LjRoot241.gff.gz |
LjRoot267 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot267.fna.gz | LjRoot267.faa.gz | LjRoot267.ffn.gz | LjRoot267.gff.gz |
LjRoot296 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot296.fna.gz | LjRoot296.faa.gz | LjRoot296.ffn.gz | LjRoot296.gff.gz |
Leaf396 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Leaf | Leaf396.fna.gz | Leaf396.faa.gz | Leaf396.ffn.gz | Leaf396.gff.gz |
LjRoot4 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot4.fna.gz | LjRoot4.faa.gz | LjRoot4.ffn.gz | LjRoot4.gff.gz |
LjRoot9 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot9.fna.gz | LjRoot9.faa.gz | LjRoot9.ffn.gz | LjRoot9.gff.gz |
Root381 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root381.fna.gz | Root381.faa.gz | Root381.ffn.gz | Root381.gff.gz |
Root670 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root670.fna.gz | Root670.faa.gz | Root670.ffn.gz | Root670.gff.gz |
LjRoot52 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot52.fna.gz | LjRoot52.faa.gz | LjRoot52.ffn.gz | LjRoot52.gff.gz |
LjRoot90 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot90.fna.gz | LjRoot90.faa.gz | LjRoot90.ffn.gz | LjRoot90.gff.gz |
Root1462 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root1462.fna.gz | Root1462.faa.gz | Root1462.ffn.gz | Root1462.gff.gz |
LjRoot142 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot142.fna.gz | LjRoot142.faa.gz | LjRoot142.ffn.gz | LjRoot142.gff.gz |
LjRoot145 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot145.fna.gz | LjRoot145.faa.gz | LjRoot145.ffn.gz | LjRoot145.gff.gz |
LjRoot220 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot220.fna.gz | LjRoot220.faa.gz | LjRoot220.ffn.gz | LjRoot220.gff.gz |
LjRoot229 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot229.fna.gz | LjRoot229.faa.gz | LjRoot229.ffn.gz | LjRoot229.gff.gz |