Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot70 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot70.fna.gz | LjRoot70.faa.gz | LjRoot70.ffn.gz | LjRoot70.gff.gz |
LjRoot71 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot71.fna.gz | LjRoot71.faa.gz | LjRoot71.ffn.gz | LjRoot71.gff.gz |
LjRoot72 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot72.fna.gz | LjRoot72.faa.gz | LjRoot72.ffn.gz | LjRoot72.gff.gz |
LjRoot73 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot73.fna.gz | LjRoot73.faa.gz | LjRoot73.ffn.gz | LjRoot73.gff.gz |
LjRoot74 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot74.fna.gz | LjRoot74.faa.gz | LjRoot74.ffn.gz | LjRoot74.gff.gz |
LjRoot75 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot75.fna.gz | LjRoot75.faa.gz | LjRoot75.ffn.gz | LjRoot75.gff.gz |
LjRoot76 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot76.fna.gz | LjRoot76.faa.gz | LjRoot76.ffn.gz | LjRoot76.gff.gz |
LjRoot77 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot77.fna.gz | LjRoot77.faa.gz | LjRoot77.ffn.gz | LjRoot77.gff.gz |
LjRoot78 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Micrococcaceae | Lotus japonicus | Root | LjRoot78.fna.gz | LjRoot78.faa.gz | LjRoot78.ffn.gz | LjRoot78.gff.gz |
LjRoot79 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot79.fna.gz | LjRoot79.faa.gz | LjRoot79.ffn.gz | LjRoot79.gff.gz |
LjRoot80 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Mycobacteriaceae | Lotus japonicus | Root | LjRoot80.fna.gz | LjRoot80.faa.gz | LjRoot80.ffn.gz | LjRoot80.gff.gz |
LjRoot82 | LjSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Lotus japonicus | Root | LjRoot82.fna.gz | LjRoot82.faa.gz | LjRoot82.ffn.gz | LjRoot82.gff.gz |
LjRoot83 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot83.fna.gz | LjRoot83.faa.gz | LjRoot83.ffn.gz | LjRoot83.gff.gz |
LjRoot84 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot84.fna.gz | LjRoot84.faa.gz | LjRoot84.ffn.gz | LjRoot84.gff.gz |
LjRoot85 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot85.fna.gz | LjRoot85.faa.gz | LjRoot85.ffn.gz | LjRoot85.gff.gz |
LjRoot86 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot86.fna.gz | LjRoot86.faa.gz | LjRoot86.ffn.gz | LjRoot86.gff.gz |
LjRoot87 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot87.fna.gz | LjRoot87.faa.gz | LjRoot87.ffn.gz | LjRoot87.gff.gz |
LjRoot88 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot88.fna.gz | LjRoot88.faa.gz | LjRoot88.ffn.gz | LjRoot88.gff.gz |
LjRoot90 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot90.fna.gz | LjRoot90.faa.gz | LjRoot90.ffn.gz | LjRoot90.gff.gz |
LjRoot91 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot91.fna.gz | LjRoot91.faa.gz | LjRoot91.ffn.gz | LjRoot91.gff.gz |