Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot4 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot4.fna.gz | LjRoot4.faa.gz | LjRoot4.ffn.gz | LjRoot4.gff.gz |
LjRoot6 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot6.fna.gz | LjRoot6.faa.gz | LjRoot6.ffn.gz | LjRoot6.gff.gz |
LjRoot7 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot7.fna.gz | LjRoot7.faa.gz | LjRoot7.ffn.gz | LjRoot7.gff.gz |
LjRoot9 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot9.fna.gz | LjRoot9.faa.gz | LjRoot9.ffn.gz | LjRoot9.gff.gz |
Root100 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root100.fna.gz | Root100.faa.gz | Root100.ffn.gz | Root100.gff.gz |
Root102 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root102.fna.gz | Root102.faa.gz | Root102.ffn.gz | Root102.gff.gz |
Root105 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Arabidopsis thaliana | Root | Root105.fna.gz | Root105.faa.gz | Root105.ffn.gz | Root105.gff.gz |
Root127 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root127.fna.gz | Root127.faa.gz | Root127.ffn.gz | Root127.gff.gz |
Root133 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root133.fna.gz | Root133.faa.gz | Root133.ffn.gz | Root133.gff.gz |
Root142 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root142.fna.gz | Root142.faa.gz | Root142.ffn.gz | Root142.gff.gz |
Root149 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root149.fna.gz | Root149.faa.gz | Root149.ffn.gz | Root149.gff.gz |
Root154 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Root | Root154.fna.gz | Root154.faa.gz | Root154.ffn.gz | Root154.gff.gz |
Root157 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root157.fna.gz | Root157.faa.gz | Root157.ffn.gz | Root157.gff.gz |
Root170 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Arabidopsis thaliana | Root | Root170.fna.gz | Root170.faa.gz | Root170.ffn.gz | Root170.gff.gz |
Root172 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root172.fna.gz | Root172.faa.gz | Root172.ffn.gz | Root172.gff.gz |
Root179 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Arabidopsis thaliana | Root | Root179.fna.gz | Root179.faa.gz | Root179.ffn.gz | Root179.gff.gz |
Root189 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root189.fna.gz | Root189.faa.gz | Root189.ffn.gz | Root189.gff.gz |
Root209 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Arabidopsis thaliana | Root | Root209.fna.gz | Root209.faa.gz | Root209.ffn.gz | Root209.gff.gz |
Root214 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Root | Root214.fna.gz | Root214.faa.gz | Root214.ffn.gz | Root214.gff.gz |
Root217 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Arabidopsis thaliana | Root | Root217.fna.gz | Root217.faa.gz | Root217.ffn.gz | Root217.gff.gz |