Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot27 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot27.fna.gz | LjRoot27.faa.gz | LjRoot27.ffn.gz | LjRoot27.gff.gz |
LjRoot47 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot47.fna.gz | LjRoot47.faa.gz | LjRoot47.ffn.gz | LjRoot47.gff.gz |
LjRoot48 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot48.fna.gz | LjRoot48.faa.gz | LjRoot48.ffn.gz | LjRoot48.gff.gz |
LjRoot49 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot49.fna.gz | LjRoot49.faa.gz | LjRoot49.ffn.gz | LjRoot49.gff.gz |
Leaf85 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf85.fna.gz | Leaf85.faa.gz | Leaf85.ffn.gz | Leaf85.gff.gz |
Leaf86 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf86.fna.gz | Leaf86.faa.gz | Leaf86.ffn.gz | Leaf86.gff.gz |
Leaf87 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf87.fna.gz | Leaf87.faa.gz | Leaf87.ffn.gz | Leaf87.gff.gz |
Leaf88 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf88.fna.gz | Leaf88.faa.gz | Leaf88.ffn.gz | Leaf88.gff.gz |
Leaf89 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf89.fna.gz | Leaf89.faa.gz | Leaf89.ffn.gz | Leaf89.gff.gz |
Leaf90 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf90.fna.gz | Leaf90.faa.gz | Leaf90.ffn.gz | Leaf90.gff.gz |
Leaf91 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf91.fna.gz | Leaf91.faa.gz | Leaf91.ffn.gz | Leaf91.gff.gz |
Leaf92 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf92.fna.gz | Leaf92.faa.gz | Leaf92.ffn.gz | Leaf92.gff.gz |
Leaf93 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf93.fna.gz | Leaf93.faa.gz | Leaf93.ffn.gz | Leaf93.gff.gz |
Leaf94 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf94.fna.gz | Leaf94.faa.gz | Leaf94.ffn.gz | Leaf94.gff.gz |
Leaf99 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf99.fna.gz | Leaf99.faa.gz | Leaf99.ffn.gz | Leaf99.gff.gz |
Leaf100 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf100.fna.gz | Leaf100.faa.gz | Leaf100.ffn.gz | Leaf100.gff.gz |
Leaf102 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf102.fna.gz | Leaf102.faa.gz | Leaf102.ffn.gz | Leaf102.gff.gz |
Leaf104 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf104.fna.gz | Leaf104.faa.gz | Leaf104.ffn.gz | Leaf104.gff.gz |
Leaf106 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf106.fna.gz | Leaf106.faa.gz | Leaf106.ffn.gz | Leaf106.gff.gz |
Leaf108 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf108.fna.gz | Leaf108.faa.gz | Leaf108.ffn.gz | Leaf108.gff.gz |
Leaf111 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf111.fna.gz | Leaf111.faa.gz | Leaf111.ffn.gz | Leaf111.gff.gz |
Leaf112 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf112.fna.gz | Leaf112.faa.gz | Leaf112.ffn.gz | Leaf112.gff.gz |
Leaf113 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf113.fna.gz | Leaf113.faa.gz | Leaf113.ffn.gz | Leaf113.gff.gz |
Leaf117 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf117.fna.gz | Leaf117.faa.gz | Leaf117.ffn.gz | Leaf117.gff.gz |
Leaf119 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf119.fna.gz | Leaf119.faa.gz | Leaf119.ffn.gz | Leaf119.gff.gz |
Leaf121 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf121.fna.gz | Leaf121.faa.gz | Leaf121.ffn.gz | Leaf121.gff.gz |
Leaf122 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf122.fna.gz | Leaf122.faa.gz | Leaf122.ffn.gz | Leaf122.gff.gz |
Leaf123 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf123.fna.gz | Leaf123.faa.gz | Leaf123.ffn.gz | Leaf123.gff.gz |
Leaf125 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf125.fna.gz | Leaf125.faa.gz | Leaf125.ffn.gz | Leaf125.gff.gz |
Leaf344 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf344.fna.gz | Leaf344.faa.gz | Leaf344.ffn.gz | Leaf344.gff.gz |
Leaf361 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf361.fna.gz | Leaf361.faa.gz | Leaf361.ffn.gz | Leaf361.gff.gz |
Leaf399 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf399.fna.gz | Leaf399.faa.gz | Leaf399.ffn.gz | Leaf399.gff.gz |
Leaf456 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf456.fna.gz | Leaf456.faa.gz | Leaf456.ffn.gz | Leaf456.gff.gz |
Leaf465 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf465.fna.gz | Leaf465.faa.gz | Leaf465.ffn.gz | Leaf465.gff.gz |
Leaf466 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf466.fna.gz | Leaf466.faa.gz | Leaf466.ffn.gz | Leaf466.gff.gz |
Leaf469 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf469.fna.gz | Leaf469.faa.gz | Leaf469.ffn.gz | Leaf469.gff.gz |
Leaf414 | AtSPHERE | Proteobacteria | Betaproteobacteria | Methylophilales | Methylophilaceae | Arabidopsis thaliana | Leaf | Leaf414.fna.gz | Leaf414.faa.gz | Leaf414.ffn.gz | Leaf414.gff.gz |
Leaf416 | AtSPHERE | Proteobacteria | Betaproteobacteria | Methylophilales | Methylophilaceae | Arabidopsis thaliana | Leaf | Leaf416.fna.gz | Leaf416.faa.gz | Leaf416.ffn.gz | Leaf416.gff.gz |
Leaf459 | AtSPHERE | Proteobacteria | Betaproteobacteria | Methylophilales | Methylophilaceae | Arabidopsis thaliana | Leaf | Leaf459.fna.gz | Leaf459.faa.gz | Leaf459.ffn.gz | Leaf459.gff.gz |
Leaf1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf1.fna.gz | Leaf1.faa.gz | Leaf1.ffn.gz | Leaf1.gff.gz |
Leaf8 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf8.fna.gz | Leaf8.faa.gz | Leaf8.ffn.gz | Leaf8.gff.gz |
Root4 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root4.fna.gz | Root4.faa.gz | Root4.ffn.gz | Root4.gff.gz |
Leaf44 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf44.fna.gz | Leaf44.faa.gz | Leaf44.ffn.gz | Leaf44.gff.gz |
Root53 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root53.fna.gz | Root53.faa.gz | Root53.ffn.gz | Root53.gff.gz |
Root60 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root60.fna.gz | Root60.faa.gz | Root60.ffn.gz | Root60.gff.gz |
Root61 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root61.fna.gz | Root61.faa.gz | Root61.ffn.gz | Root61.gff.gz |
Root81 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root81.fna.gz | Root81.faa.gz | Root81.ffn.gz | Root81.gff.gz |
Leaf151 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf151.fna.gz | Leaf151.faa.gz | Leaf151.ffn.gz | Leaf151.gff.gz |
Leaf154 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf154.fna.gz | Leaf154.faa.gz | Leaf154.ffn.gz | Leaf154.gff.gz |
Leaf159 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf159.fna.gz | Leaf159.faa.gz | Leaf159.ffn.gz | Leaf159.gff.gz |