Culture Collection Overview

Strain ID	Collection ID	Phylum	Class	Order	Family	Host	Environment	Assemblies	ORFs AA	ORFs NT	GFFs
LjRoot272	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot272.fna.gz	LjRoot272.faa.gz	LjRoot272.ffn.gz	LjRoot272.gff.gz
LjRoot273	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Rhizobiaceae	Lotus japonicus	Root	LjRoot273.fna.gz	LjRoot273.faa.gz	LjRoot273.ffn.gz	LjRoot273.gff.gz
LjRoot274	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Rhizobiaceae	Lotus japonicus	Root	LjRoot274.fna.gz	LjRoot274.faa.gz	LjRoot274.ffn.gz	LjRoot274.gff.gz
LjRoot275	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot275.fna.gz	LjRoot275.faa.gz	LjRoot275.ffn.gz	LjRoot275.gff.gz
LjRoot276	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot276.fna.gz	LjRoot276.faa.gz	LjRoot276.ffn.gz	LjRoot276.gff.gz
LjRoot277	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot277.fna.gz	LjRoot277.faa.gz	LjRoot277.ffn.gz	LjRoot277.gff.gz
LjRoot279	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot279.fna.gz	LjRoot279.faa.gz	LjRoot279.ffn.gz	LjRoot279.gff.gz
LjRoot280	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot280.fna.gz	LjRoot280.faa.gz	LjRoot280.ffn.gz	LjRoot280.gff.gz
LjRoot281	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot281.fna.gz	LjRoot281.faa.gz	LjRoot281.ffn.gz	LjRoot281.gff.gz
LjRoot282	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot282.fna.gz	LjRoot282.faa.gz	LjRoot282.ffn.gz	LjRoot282.gff.gz
LjRoot283	LjSPHERE	Actinobacteria	Actinobacteria	Actinomycetales	Micrococcaceae	Lotus japonicus	Root	LjRoot283.fna.gz	LjRoot283.faa.gz	LjRoot283.ffn.gz	LjRoot283.gff.gz
LjRoot284	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot284.fna.gz	LjRoot284.faa.gz	LjRoot284.ffn.gz	LjRoot284.gff.gz
LjRoot285	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot285.fna.gz	LjRoot285.faa.gz	LjRoot285.ffn.gz	LjRoot285.gff.gz
LjRoot286	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot286.fna.gz	LjRoot286.faa.gz	LjRoot286.ffn.gz	LjRoot286.gff.gz
LjRoot287	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot287.fna.gz	LjRoot287.faa.gz	LjRoot287.ffn.gz	LjRoot287.gff.gz
LjRoot288	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot288.fna.gz	LjRoot288.faa.gz	LjRoot288.ffn.gz	LjRoot288.gff.gz
LjRoot289	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot289.fna.gz	LjRoot289.faa.gz	LjRoot289.ffn.gz	LjRoot289.gff.gz
LjRoot290	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot290.fna.gz	LjRoot290.faa.gz	LjRoot290.ffn.gz	LjRoot290.gff.gz
LjRoot291	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot291.fna.gz	LjRoot291.faa.gz	LjRoot291.ffn.gz	LjRoot291.gff.gz
LjRoot293	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Bradyrhizobiaceae	Lotus japonicus	Root	LjRoot293.fna.gz	LjRoot293.faa.gz	LjRoot293.ffn.gz	LjRoot293.gff.gz
LjRoot294	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot294.fna.gz	LjRoot294.faa.gz	LjRoot294.ffn.gz	LjRoot294.gff.gz
LjRoot295	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot295.fna.gz	LjRoot295.faa.gz	LjRoot295.ffn.gz	LjRoot295.gff.gz
LjRoot296	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Burkholderiaceae	Lotus japonicus	Root	LjRoot296.fna.gz	LjRoot296.faa.gz	LjRoot296.ffn.gz	LjRoot296.gff.gz
LjRoot297	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Bradyrhizobiaceae	Lotus japonicus	Root	LjRoot297.fna.gz	LjRoot297.faa.gz	LjRoot297.ffn.gz	LjRoot297.gff.gz
LjRoot298	LjSPHERE	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Lotus japonicus	Root	LjRoot298.fna.gz	LjRoot298.faa.gz	LjRoot298.ffn.gz	LjRoot298.gff.gz
LjRoot299	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot299.fna.gz	LjRoot299.faa.gz	LjRoot299.ffn.gz	LjRoot299.gff.gz
LjRoot300	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot300.fna.gz	LjRoot300.faa.gz	LjRoot300.ffn.gz	LjRoot300.gff.gz
LjRoot301	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot301.fna.gz	LjRoot301.faa.gz	LjRoot301.ffn.gz	LjRoot301.gff.gz
LjRoot302	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot302.fna.gz	LjRoot302.faa.gz	LjRoot302.ffn.gz	LjRoot302.gff.gz
LjRoot303	LjSPHERE	Actinobacteria	Actinobacteria	Actinomycetales	Streptomycetaceae	Lotus japonicus	Root	LjRoot303.fna.gz	LjRoot303.faa.gz	LjRoot303.ffn.gz	LjRoot303.gff.gz
LjRoot304	LjSPHERE	Actinobacteria	Actinobacteria	Actinomycetales	Streptomycetaceae	Lotus japonicus	Root	LjRoot304.fna.gz	LjRoot304.faa.gz	LjRoot304.ffn.gz	LjRoot304.gff.gz
LjRoot305	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot305.fna.gz	LjRoot305.faa.gz	LjRoot305.ffn.gz	LjRoot305.gff.gz
LjRoot306	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot306.fna.gz	LjRoot306.faa.gz	LjRoot306.ffn.gz	LjRoot306.gff.gz
LjRoot307	LjSPHERE	Actinobacteria	Actinobacteria	Actinomycetales	Streptomycetaceae	Lotus japonicus	Root	LjRoot307.fna.gz	LjRoot307.faa.gz	LjRoot307.ffn.gz	LjRoot307.gff.gz
LjNodule209	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule209.fna.gz	LjNodule209.faa.gz	LjNodule209.ffn.gz	LjNodule209.gff.gz
LjNodule210	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule210.fna.gz	LjNodule210.faa.gz	LjNodule210.ffn.gz	LjNodule210.gff.gz
LjNodule211	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule211.fna.gz	LjNodule211.faa.gz	LjNodule211.ffn.gz	LjNodule211.gff.gz
LjNodule212	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule212.fna.gz	LjNodule212.faa.gz	LjNodule212.ffn.gz	LjNodule212.gff.gz
LjNodule213	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule213.fna.gz	LjNodule213.faa.gz	LjNodule213.ffn.gz	LjNodule213.gff.gz
LjNodule214	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule214.fna.gz	LjNodule214.faa.gz	LjNodule214.ffn.gz	LjNodule214.gff.gz
LjNodule215	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule215.fna.gz	LjNodule215.faa.gz	LjNodule215.ffn.gz	LjNodule215.gff.gz
LjNodule217	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule217.fna.gz	LjNodule217.faa.gz	LjNodule217.ffn.gz	LjNodule217.gff.gz
LjNodule218	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Nodule	LjNodule218.fna.gz	LjNodule218.faa.gz	LjNodule218.ffn.gz	LjNodule218.gff.gz
Dendryphion nanum; Denna1; MPI-CAGE-CH-0243	Endophytes	Ascomycota	Dothideomycetes	Pleosporales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Fusarium venenatum; Fusven1; MPI-CAGE-CH-0201	Endophytes	Ascomycota	Sordariomycetes	Hypocreales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Fusarium oxysporum; Fusoxys1; MPI-CAGE-CH-0212	Endophytes	Ascomycota	Sordariomycetes	Hypocreales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Stachybotrys elegans; Stael1; MPI-CAGE-CH-0235	Endophytes	Ascomycota	Sordariomycetes	Hypocreales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Cylindrocarpon olidum; Cylol1; MPI-CAGE-CH-0241	Endophytes	Ascomycota	Sordariomycetes	Hypocreales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Microdochium trichocladiopsis; Mictri1; MPI-CAGE-CH-0230	Endophytes	Ascomycota	Sordariomycetes	Xylariales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Fusarium sp.; Fuseq1; MPI-CAGE-AA-0113	Endophytes	Ascomycota	Sordariomycetes	Hypocreales	—	Arabis alpina	—	assemblies	ORFs_AA	ORFs_NT	GFFs