Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot195 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot195.fna.gz | LjRoot195.faa.gz | LjRoot195.ffn.gz | LjRoot195.gff.gz |
LjRoot197 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot197.fna.gz | LjRoot197.faa.gz | LjRoot197.ffn.gz | LjRoot197.gff.gz |
LjRoot232 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot232.fna.gz | LjRoot232.faa.gz | LjRoot232.ffn.gz | LjRoot232.gff.gz |
LjRoot247 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot247.fna.gz | LjRoot247.faa.gz | LjRoot247.ffn.gz | LjRoot247.gff.gz |
LjRoot250 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot250.fna.gz | LjRoot250.faa.gz | LjRoot250.ffn.gz | LjRoot250.gff.gz |
LjRoot252 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot252.fna.gz | LjRoot252.faa.gz | LjRoot252.ffn.gz | LjRoot252.gff.gz |
LjRoot263 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot263.fna.gz | LjRoot263.faa.gz | LjRoot263.ffn.gz | LjRoot263.gff.gz |
LjRoot264 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot264.fna.gz | LjRoot264.faa.gz | LjRoot264.ffn.gz | LjRoot264.gff.gz |
LjRoot268 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot268.fna.gz | LjRoot268.faa.gz | LjRoot268.ffn.gz | LjRoot268.gff.gz |
LjRoot277 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot277.fna.gz | LjRoot277.faa.gz | LjRoot277.ffn.gz | LjRoot277.gff.gz |
LjRoot279 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot279.fna.gz | LjRoot279.faa.gz | LjRoot279.ffn.gz | LjRoot279.gff.gz |
LjRoot281 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot281.fna.gz | LjRoot281.faa.gz | LjRoot281.ffn.gz | LjRoot281.gff.gz |
LjRoot286 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot286.fna.gz | LjRoot286.faa.gz | LjRoot286.ffn.gz | LjRoot286.gff.gz |
LjRoot298 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot298.fna.gz | LjRoot298.faa.gz | LjRoot298.ffn.gz | LjRoot298.gff.gz |
Leaf82 | AtSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arabidopsis thaliana | Leaf | Leaf82.fna.gz | Leaf82.faa.gz | Leaf82.ffn.gz | Leaf82.gff.gz |
Leaf180 | AtSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arabidopsis thaliana | Leaf | Leaf180.fna.gz | Leaf180.faa.gz | Leaf180.ffn.gz | Leaf180.gff.gz |
Leaf201 | AtSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arabidopsis thaliana | Leaf | Leaf201.fna.gz | Leaf201.faa.gz | Leaf201.ffn.gz | Leaf201.gff.gz |
Leaf359 | AtSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arabidopsis thaliana | Leaf | Leaf359.fna.gz | Leaf359.faa.gz | Leaf359.ffn.gz | Leaf359.gff.gz |
Leaf394 | AtSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arabidopsis thaliana | Leaf | Leaf394.fna.gz | Leaf394.faa.gz | Leaf394.ffn.gz | Leaf394.gff.gz |
Leaf404 | AtSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arabidopsis thaliana | Leaf | Leaf404.fna.gz | Leaf404.faa.gz | Leaf404.ffn.gz | Leaf404.gff.gz |