Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
Soil531 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Soil | Soil | Soil531.fna.gz | Soil531.faa.gz | Soil531.ffn.gz | Soil531.gff.gz |
Soil745 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Soil | Soil | Soil745.fna.gz | Soil745.faa.gz | Soil745.ffn.gz | Soil745.gff.gz |
LjRoot15 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot15.fna.gz | LjRoot15.faa.gz | LjRoot15.ffn.gz | LjRoot15.gff.gz |
LjRoot53 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot53.fna.gz | LjRoot53.faa.gz | LjRoot53.ffn.gz | LjRoot53.gff.gz |
Soil768D1 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Soil | Soil | Soil768D1.fna.gz | Soil768D1.faa.gz | Soil768D1.ffn.gz | Soil768D1.gff.gz |
Leaf396 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Leaf | Leaf396.fna.gz | Leaf396.faa.gz | Leaf396.ffn.gz | Leaf396.gff.gz |
LjRoot4 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot4.fna.gz | LjRoot4.faa.gz | LjRoot4.ffn.gz | LjRoot4.gff.gz |
LjRoot9 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot9.fna.gz | LjRoot9.faa.gz | LjRoot9.ffn.gz | LjRoot9.gff.gz |
Root381 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root381.fna.gz | Root381.faa.gz | Root381.ffn.gz | Root381.gff.gz |
Root670 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root670.fna.gz | Root670.faa.gz | Root670.ffn.gz | Root670.gff.gz |
LjRoot52 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot52.fna.gz | LjRoot52.faa.gz | LjRoot52.ffn.gz | LjRoot52.gff.gz |
LjRoot90 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot90.fna.gz | LjRoot90.faa.gz | LjRoot90.ffn.gz | LjRoot90.gff.gz |
Root1462 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root1462.fna.gz | Root1462.faa.gz | Root1462.ffn.gz | Root1462.gff.gz |
LjRoot142 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot142.fna.gz | LjRoot142.faa.gz | LjRoot142.ffn.gz | LjRoot142.gff.gz |
LjRoot145 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot145.fna.gz | LjRoot145.faa.gz | LjRoot145.ffn.gz | LjRoot145.gff.gz |
LjRoot220 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot220.fna.gz | LjRoot220.faa.gz | LjRoot220.ffn.gz | LjRoot220.gff.gz |
LjRoot229 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot229.fna.gz | LjRoot229.faa.gz | LjRoot229.ffn.gz | LjRoot229.gff.gz |
LjRoot233 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot233.fna.gz | LjRoot233.faa.gz | LjRoot233.ffn.gz | LjRoot233.gff.gz |
LjRoot237 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot237.fna.gz | LjRoot237.faa.gz | LjRoot237.ffn.gz | LjRoot237.gff.gz |
LjRoot243 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot243.fna.gz | LjRoot243.faa.gz | LjRoot243.ffn.gz | LjRoot243.gff.gz |