Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot300 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot300.fna.gz | LjRoot300.faa.gz | LjRoot300.ffn.gz | LjRoot300.gff.gz |
LjRoot301 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot301.fna.gz | LjRoot301.faa.gz | LjRoot301.ffn.gz | LjRoot301.gff.gz |
LjRoot302 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot302.fna.gz | LjRoot302.faa.gz | LjRoot302.ffn.gz | LjRoot302.gff.gz |
LjRoot303 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot303.fna.gz | LjRoot303.faa.gz | LjRoot303.ffn.gz | LjRoot303.gff.gz |
LjRoot304 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot304.fna.gz | LjRoot304.faa.gz | LjRoot304.ffn.gz | LjRoot304.gff.gz |
LjRoot305 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot305.fna.gz | LjRoot305.faa.gz | LjRoot305.ffn.gz | LjRoot305.gff.gz |
LjRoot306 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot306.fna.gz | LjRoot306.faa.gz | LjRoot306.ffn.gz | LjRoot306.gff.gz |
LjRoot307 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot307.fna.gz | LjRoot307.faa.gz | LjRoot307.ffn.gz | LjRoot307.gff.gz |
Root112D2 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root112D2.fna.gz | Root112D2.faa.gz | Root112D2.ffn.gz | Root112D2.gff.gz |
Root123D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root123D2.fna.gz | Root123D2.faa.gz | Root123D2.ffn.gz | Root123D2.gff.gz |
Root198D2 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root198D2.fna.gz | Root198D2.faa.gz | Root198D2.ffn.gz | Root198D2.gff.gz |
Root280D1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root280D1.fna.gz | Root280D1.faa.gz | Root280D1.ffn.gz | Root280D1.gff.gz |
Root318D1 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Arabidopsis thaliana | Root | Root318D1.fna.gz | Root318D1.faa.gz | Root318D1.ffn.gz | Root318D1.gff.gz |
Root336D2 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root336D2.fna.gz | Root336D2.faa.gz | Root336D2.ffn.gz | Root336D2.gff.gz |
Root413D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Arabidopsis thaliana | Root | Root413D1.fna.gz | Root413D1.faa.gz | Root413D1.ffn.gz | Root413D1.gff.gz |
Root444D2 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Root | Root444D2.fna.gz | Root444D2.faa.gz | Root444D2.ffn.gz | Root444D2.gff.gz |
Root472D3 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Nocardioidaceae | Arabidopsis thaliana | Root | Root472D3.fna.gz | Root472D3.faa.gz | Root472D3.ffn.gz | Root472D3.gff.gz |
Root483D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root483D1.fna.gz | Root483D1.faa.gz | Root483D1.ffn.gz | Root483D1.gff.gz |
Root483D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root483D2.fna.gz | Root483D2.faa.gz | Root483D2.ffn.gz | Root483D2.gff.gz |
Root1433D1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root1433D1.fna.gz | Root1433D1.faa.gz | Root1433D1.ffn.gz | Root1433D1.gff.gz |