Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot258 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot258.fna.gz | LjRoot258.faa.gz | LjRoot258.ffn.gz | LjRoot258.gff.gz |
LjRoot261 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot261.fna.gz | LjRoot261.faa.gz | LjRoot261.ffn.gz | LjRoot261.gff.gz |
LjRoot265 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot265.fna.gz | LjRoot265.faa.gz | LjRoot265.ffn.gz | LjRoot265.gff.gz |
LjRoot273 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot273.fna.gz | LjRoot273.faa.gz | LjRoot273.ffn.gz | LjRoot273.gff.gz |
LjRoot274 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot274.fna.gz | LjRoot274.faa.gz | LjRoot274.ffn.gz | LjRoot274.gff.gz |
LjRoot293 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot293.fna.gz | LjRoot293.faa.gz | LjRoot293.ffn.gz | LjRoot293.gff.gz |
LjRoot297 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot297.fna.gz | LjRoot297.faa.gz | LjRoot297.ffn.gz | LjRoot297.gff.gz |
Root123D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root123D2.fna.gz | Root123D2.faa.gz | Root123D2.ffn.gz | Root123D2.gff.gz |
Root413D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Arabidopsis thaliana | Root | Root413D1.fna.gz | Root413D1.faa.gz | Root413D1.ffn.gz | Root413D1.gff.gz |
Root483D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root483D1.fna.gz | Root483D1.faa.gz | Root483D1.ffn.gz | Root483D1.gff.gz |
Root483D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root483D2.fna.gz | Root483D2.faa.gz | Root483D2.ffn.gz | Root483D2.gff.gz |
LjNodule209 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule209.fna.gz | LjNodule209.faa.gz | LjNodule209.ffn.gz | LjNodule209.gff.gz |
LjNodule210 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule210.fna.gz | LjNodule210.faa.gz | LjNodule210.ffn.gz | LjNodule210.gff.gz |
LjNodule211 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule211.fna.gz | LjNodule211.faa.gz | LjNodule211.ffn.gz | LjNodule211.gff.gz |
LjNodule212 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule212.fna.gz | LjNodule212.faa.gz | LjNodule212.ffn.gz | LjNodule212.gff.gz |
LjNodule213 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule213.fna.gz | LjNodule213.faa.gz | LjNodule213.ffn.gz | LjNodule213.gff.gz |
LjNodule214 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule214.fna.gz | LjNodule214.faa.gz | LjNodule214.ffn.gz | LjNodule214.gff.gz |
LjNodule215 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule215.fna.gz | LjNodule215.faa.gz | LjNodule215.ffn.gz | LjNodule215.gff.gz |
LjNodule217 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule217.fna.gz | LjNodule217.faa.gz | LjNodule217.ffn.gz | LjNodule217.gff.gz |
LjNodule218 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule218.fna.gz | LjNodule218.faa.gz | LjNodule218.ffn.gz | LjNodule218.gff.gz |