Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot10 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot10.fna.gz | LjRoot10.faa.gz | LjRoot10.ffn.gz | LjRoot10.gff.gz |
LjRoot11 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot11.fna.gz | LjRoot11.faa.gz | LjRoot11.ffn.gz | LjRoot11.gff.gz |
LjRoot12 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot12.fna.gz | LjRoot12.faa.gz | LjRoot12.ffn.gz | LjRoot12.gff.gz |
LjRoot13 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Micrococcaceae | Lotus japonicus | Root | LjRoot13.fna.gz | LjRoot13.faa.gz | LjRoot13.ffn.gz | LjRoot13.gff.gz |
LjRoot15 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot15.fna.gz | LjRoot15.faa.gz | LjRoot15.ffn.gz | LjRoot15.gff.gz |
LjRoot16 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Lotus japonicus | Root | LjRoot16.fna.gz | LjRoot16.faa.gz | LjRoot16.ffn.gz | LjRoot16.gff.gz |
LjRoot17 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot17.fna.gz | LjRoot17.faa.gz | LjRoot17.ffn.gz | LjRoot17.gff.gz |
LjRoot18 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot18.fna.gz | LjRoot18.faa.gz | LjRoot18.ffn.gz | LjRoot18.gff.gz |
LjRoot19 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot19.fna.gz | LjRoot19.faa.gz | LjRoot19.ffn.gz | LjRoot19.gff.gz |
LjRoot20 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot20.fna.gz | LjRoot20.faa.gz | LjRoot20.ffn.gz | LjRoot20.gff.gz |
LjRoot21 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot21.fna.gz | LjRoot21.faa.gz | LjRoot21.ffn.gz | LjRoot21.gff.gz |
LjRoot22 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot22.fna.gz | LjRoot22.faa.gz | LjRoot22.ffn.gz | LjRoot22.gff.gz |
LjRoot24 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot24.fna.gz | LjRoot24.faa.gz | LjRoot24.ffn.gz | LjRoot24.gff.gz |
LjRoot25 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot25.fna.gz | LjRoot25.faa.gz | LjRoot25.ffn.gz | LjRoot25.gff.gz |
LjRoot26 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot26.fna.gz | LjRoot26.faa.gz | LjRoot26.ffn.gz | LjRoot26.gff.gz |
LjRoot27 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot27.fna.gz | LjRoot27.faa.gz | LjRoot27.ffn.gz | LjRoot27.gff.gz |
LjRoot28 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot28.fna.gz | LjRoot28.faa.gz | LjRoot28.ffn.gz | LjRoot28.gff.gz |
LjRoot29 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot29.fna.gz | LjRoot29.faa.gz | LjRoot29.ffn.gz | LjRoot29.gff.gz |
LjRoot30 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot30.fna.gz | LjRoot30.faa.gz | LjRoot30.ffn.gz | LjRoot30.gff.gz |
LjRoot31 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot31.fna.gz | LjRoot31.faa.gz | LjRoot31.ffn.gz | LjRoot31.gff.gz |