Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot54 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot54.fna.gz | LjRoot54.faa.gz | LjRoot54.ffn.gz | LjRoot54.gff.gz |
LjRoot59 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot59.fna.gz | LjRoot59.faa.gz | LjRoot59.ffn.gz | LjRoot59.gff.gz |
LjRoot60 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot60.fna.gz | LjRoot60.faa.gz | LjRoot60.ffn.gz | LjRoot60.gff.gz |
LjRoot62 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot62.fna.gz | LjRoot62.faa.gz | LjRoot62.ffn.gz | LjRoot62.gff.gz |
LjRoot63 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot63.fna.gz | LjRoot63.faa.gz | LjRoot63.ffn.gz | LjRoot63.gff.gz |
LjRoot65 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot65.fna.gz | LjRoot65.faa.gz | LjRoot65.ffn.gz | LjRoot65.gff.gz |
LjRoot66 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot66.fna.gz | LjRoot66.faa.gz | LjRoot66.ffn.gz | LjRoot66.gff.gz |
LjRoot67 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot67.fna.gz | LjRoot67.faa.gz | LjRoot67.ffn.gz | LjRoot67.gff.gz |
LjRoot68 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot68.fna.gz | LjRoot68.faa.gz | LjRoot68.ffn.gz | LjRoot68.gff.gz |
LjRoot69 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot69.fna.gz | LjRoot69.faa.gz | LjRoot69.ffn.gz | LjRoot69.gff.gz |
LjRoot70 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot70.fna.gz | LjRoot70.faa.gz | LjRoot70.ffn.gz | LjRoot70.gff.gz |
LjRoot71 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot71.fna.gz | LjRoot71.faa.gz | LjRoot71.ffn.gz | LjRoot71.gff.gz |
LjRoot72 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot72.fna.gz | LjRoot72.faa.gz | LjRoot72.ffn.gz | LjRoot72.gff.gz |
LjRoot73 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot73.fna.gz | LjRoot73.faa.gz | LjRoot73.ffn.gz | LjRoot73.gff.gz |
LjRoot74 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot74.fna.gz | LjRoot74.faa.gz | LjRoot74.ffn.gz | LjRoot74.gff.gz |
LjRoot75 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot75.fna.gz | LjRoot75.faa.gz | LjRoot75.ffn.gz | LjRoot75.gff.gz |
LjRoot76 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot76.fna.gz | LjRoot76.faa.gz | LjRoot76.ffn.gz | LjRoot76.gff.gz |
LjRoot77 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot77.fna.gz | LjRoot77.faa.gz | LjRoot77.ffn.gz | LjRoot77.gff.gz |
LjRoot78 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Micrococcaceae | Lotus japonicus | Root | LjRoot78.fna.gz | LjRoot78.faa.gz | LjRoot78.ffn.gz | LjRoot78.gff.gz |
LjRoot79 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot79.fna.gz | LjRoot79.faa.gz | LjRoot79.ffn.gz | LjRoot79.gff.gz |
LjRoot80 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Mycobacteriaceae | Lotus japonicus | Root | LjRoot80.fna.gz | LjRoot80.faa.gz | LjRoot80.ffn.gz | LjRoot80.gff.gz |
LjRoot82 | LjSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Lotus japonicus | Root | LjRoot82.fna.gz | LjRoot82.faa.gz | LjRoot82.ffn.gz | LjRoot82.gff.gz |
LjRoot83 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot83.fna.gz | LjRoot83.faa.gz | LjRoot83.ffn.gz | LjRoot83.gff.gz |
LjRoot84 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot84.fna.gz | LjRoot84.faa.gz | LjRoot84.ffn.gz | LjRoot84.gff.gz |
LjRoot85 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot85.fna.gz | LjRoot85.faa.gz | LjRoot85.ffn.gz | LjRoot85.gff.gz |
LjRoot86 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot86.fna.gz | LjRoot86.faa.gz | LjRoot86.ffn.gz | LjRoot86.gff.gz |
LjRoot87 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot87.fna.gz | LjRoot87.faa.gz | LjRoot87.ffn.gz | LjRoot87.gff.gz |
LjRoot88 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot88.fna.gz | LjRoot88.faa.gz | LjRoot88.ffn.gz | LjRoot88.gff.gz |
LjRoot90 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot90.fna.gz | LjRoot90.faa.gz | LjRoot90.ffn.gz | LjRoot90.gff.gz |
LjRoot91 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot91.fna.gz | LjRoot91.faa.gz | LjRoot91.ffn.gz | LjRoot91.gff.gz |
LjRoot92 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot92.fna.gz | LjRoot92.faa.gz | LjRoot92.ffn.gz | LjRoot92.gff.gz |
LjRoot93 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot93.fna.gz | LjRoot93.faa.gz | LjRoot93.ffn.gz | LjRoot93.gff.gz |
LjRoot94 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot94.fna.gz | LjRoot94.faa.gz | LjRoot94.ffn.gz | LjRoot94.gff.gz |
LjRoot95 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot95.fna.gz | LjRoot95.faa.gz | LjRoot95.ffn.gz | LjRoot95.gff.gz |
LjRoot96 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot96.fna.gz | LjRoot96.faa.gz | LjRoot96.ffn.gz | LjRoot96.gff.gz |
LjRoot97 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot97.fna.gz | LjRoot97.faa.gz | LjRoot97.ffn.gz | LjRoot97.gff.gz |
LjRoot98 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot98.fna.gz | LjRoot98.faa.gz | LjRoot98.ffn.gz | LjRoot98.gff.gz |
LjRoot99 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot99.fna.gz | LjRoot99.faa.gz | LjRoot99.ffn.gz | LjRoot99.gff.gz |
LjRoot101 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot101.fna.gz | LjRoot101.faa.gz | LjRoot101.ffn.gz | LjRoot101.gff.gz |
LjRoot102 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot102.fna.gz | LjRoot102.faa.gz | LjRoot102.ffn.gz | LjRoot102.gff.gz |
LjRoot103 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot103.fna.gz | LjRoot103.faa.gz | LjRoot103.ffn.gz | LjRoot103.gff.gz |
LjRoot104 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot104.fna.gz | LjRoot104.faa.gz | LjRoot104.ffn.gz | LjRoot104.gff.gz |
LjRoot105 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot105.fna.gz | LjRoot105.faa.gz | LjRoot105.ffn.gz | LjRoot105.gff.gz |
LjRoot107 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot107.fna.gz | LjRoot107.faa.gz | LjRoot107.ffn.gz | LjRoot107.gff.gz |
LjRoot109 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot109.fna.gz | LjRoot109.faa.gz | LjRoot109.ffn.gz | LjRoot109.gff.gz |
LjRoot111 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot111.fna.gz | LjRoot111.faa.gz | LjRoot111.ffn.gz | LjRoot111.gff.gz |
LjRoot117 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot117.fna.gz | LjRoot117.faa.gz | LjRoot117.ffn.gz | LjRoot117.gff.gz |
LjRoot118 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot118.fna.gz | LjRoot118.faa.gz | LjRoot118.ffn.gz | LjRoot118.gff.gz |
LjRoot120 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot120.fna.gz | LjRoot120.faa.gz | LjRoot120.ffn.gz | LjRoot120.gff.gz |
LjRoot121 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot121.fna.gz | LjRoot121.faa.gz | LjRoot121.ffn.gz | LjRoot121.gff.gz |