Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot268 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot268.fna.gz | LjRoot268.faa.gz | LjRoot268.ffn.gz | LjRoot268.gff.gz |
LjRoot269 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot269.fna.gz | LjRoot269.faa.gz | LjRoot269.ffn.gz | LjRoot269.gff.gz |
LjRoot270 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot270.fna.gz | LjRoot270.faa.gz | LjRoot270.ffn.gz | LjRoot270.gff.gz |
LjRoot271 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot271.fna.gz | LjRoot271.faa.gz | LjRoot271.ffn.gz | LjRoot271.gff.gz |
LjRoot272 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot272.fna.gz | LjRoot272.faa.gz | LjRoot272.ffn.gz | LjRoot272.gff.gz |
LjRoot273 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot273.fna.gz | LjRoot273.faa.gz | LjRoot273.ffn.gz | LjRoot273.gff.gz |
LjRoot274 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot274.fna.gz | LjRoot274.faa.gz | LjRoot274.ffn.gz | LjRoot274.gff.gz |
LjRoot275 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot275.fna.gz | LjRoot275.faa.gz | LjRoot275.ffn.gz | LjRoot275.gff.gz |
LjRoot276 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot276.fna.gz | LjRoot276.faa.gz | LjRoot276.ffn.gz | LjRoot276.gff.gz |
LjRoot277 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot277.fna.gz | LjRoot277.faa.gz | LjRoot277.ffn.gz | LjRoot277.gff.gz |
LjRoot279 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot279.fna.gz | LjRoot279.faa.gz | LjRoot279.ffn.gz | LjRoot279.gff.gz |
LjRoot280 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot280.fna.gz | LjRoot280.faa.gz | LjRoot280.ffn.gz | LjRoot280.gff.gz |
LjRoot281 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot281.fna.gz | LjRoot281.faa.gz | LjRoot281.ffn.gz | LjRoot281.gff.gz |
LjRoot282 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot282.fna.gz | LjRoot282.faa.gz | LjRoot282.ffn.gz | LjRoot282.gff.gz |
LjRoot283 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Micrococcaceae | Lotus japonicus | Root | LjRoot283.fna.gz | LjRoot283.faa.gz | LjRoot283.ffn.gz | LjRoot283.gff.gz |
LjRoot284 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot284.fna.gz | LjRoot284.faa.gz | LjRoot284.ffn.gz | LjRoot284.gff.gz |
LjRoot285 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot285.fna.gz | LjRoot285.faa.gz | LjRoot285.ffn.gz | LjRoot285.gff.gz |
LjRoot286 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot286.fna.gz | LjRoot286.faa.gz | LjRoot286.ffn.gz | LjRoot286.gff.gz |
LjRoot287 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot287.fna.gz | LjRoot287.faa.gz | LjRoot287.ffn.gz | LjRoot287.gff.gz |
LjRoot288 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot288.fna.gz | LjRoot288.faa.gz | LjRoot288.ffn.gz | LjRoot288.gff.gz |
LjRoot289 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot289.fna.gz | LjRoot289.faa.gz | LjRoot289.ffn.gz | LjRoot289.gff.gz |
LjRoot290 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot290.fna.gz | LjRoot290.faa.gz | LjRoot290.ffn.gz | LjRoot290.gff.gz |
LjRoot291 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot291.fna.gz | LjRoot291.faa.gz | LjRoot291.ffn.gz | LjRoot291.gff.gz |
LjRoot293 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot293.fna.gz | LjRoot293.faa.gz | LjRoot293.ffn.gz | LjRoot293.gff.gz |
LjRoot294 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot294.fna.gz | LjRoot294.faa.gz | LjRoot294.ffn.gz | LjRoot294.gff.gz |
LjRoot295 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot295.fna.gz | LjRoot295.faa.gz | LjRoot295.ffn.gz | LjRoot295.gff.gz |
LjRoot296 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot296.fna.gz | LjRoot296.faa.gz | LjRoot296.ffn.gz | LjRoot296.gff.gz |
LjRoot297 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot297.fna.gz | LjRoot297.faa.gz | LjRoot297.ffn.gz | LjRoot297.gff.gz |
LjRoot298 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot298.fna.gz | LjRoot298.faa.gz | LjRoot298.ffn.gz | LjRoot298.gff.gz |
LjRoot299 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot299.fna.gz | LjRoot299.faa.gz | LjRoot299.ffn.gz | LjRoot299.gff.gz |
LjRoot300 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot300.fna.gz | LjRoot300.faa.gz | LjRoot300.ffn.gz | LjRoot300.gff.gz |
LjRoot301 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot301.fna.gz | LjRoot301.faa.gz | LjRoot301.ffn.gz | LjRoot301.gff.gz |
LjRoot302 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot302.fna.gz | LjRoot302.faa.gz | LjRoot302.ffn.gz | LjRoot302.gff.gz |
LjRoot303 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot303.fna.gz | LjRoot303.faa.gz | LjRoot303.ffn.gz | LjRoot303.gff.gz |
LjRoot304 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot304.fna.gz | LjRoot304.faa.gz | LjRoot304.ffn.gz | LjRoot304.gff.gz |
LjRoot305 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot305.fna.gz | LjRoot305.faa.gz | LjRoot305.ffn.gz | LjRoot305.gff.gz |
LjRoot306 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot306.fna.gz | LjRoot306.faa.gz | LjRoot306.ffn.gz | LjRoot306.gff.gz |
LjRoot307 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot307.fna.gz | LjRoot307.faa.gz | LjRoot307.ffn.gz | LjRoot307.gff.gz |
Root112D2 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root112D2.fna.gz | Root112D2.faa.gz | Root112D2.ffn.gz | Root112D2.gff.gz |
Root123D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root123D2.fna.gz | Root123D2.faa.gz | Root123D2.ffn.gz | Root123D2.gff.gz |
Root198D2 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root198D2.fna.gz | Root198D2.faa.gz | Root198D2.ffn.gz | Root198D2.gff.gz |
Root280D1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root280D1.fna.gz | Root280D1.faa.gz | Root280D1.ffn.gz | Root280D1.gff.gz |
Root318D1 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Arabidopsis thaliana | Root | Root318D1.fna.gz | Root318D1.faa.gz | Root318D1.ffn.gz | Root318D1.gff.gz |
Root336D2 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root336D2.fna.gz | Root336D2.faa.gz | Root336D2.ffn.gz | Root336D2.gff.gz |
Root413D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Arabidopsis thaliana | Root | Root413D1.fna.gz | Root413D1.faa.gz | Root413D1.ffn.gz | Root413D1.gff.gz |
Root444D2 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Root | Root444D2.fna.gz | Root444D2.faa.gz | Root444D2.ffn.gz | Root444D2.gff.gz |
Root472D3 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Nocardioidaceae | Arabidopsis thaliana | Root | Root472D3.fna.gz | Root472D3.faa.gz | Root472D3.ffn.gz | Root472D3.gff.gz |
Root483D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root483D1.fna.gz | Root483D1.faa.gz | Root483D1.ffn.gz | Root483D1.gff.gz |
Root483D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root483D2.fna.gz | Root483D2.faa.gz | Root483D2.ffn.gz | Root483D2.gff.gz |
Root1433D1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root1433D1.fna.gz | Root1433D1.faa.gz | Root1433D1.ffn.gz | Root1433D1.gff.gz |