Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
Leaf9 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf9.fna.gz | Leaf9.faa.gz | Leaf9.ffn.gz | Leaf9.gff.gz |
Leaf90 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf90.fna.gz | Leaf90.faa.gz | Leaf90.ffn.gz | Leaf90.gff.gz |
Leaf91 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf91.fna.gz | Leaf91.faa.gz | Leaf91.ffn.gz | Leaf91.gff.gz |
Leaf92 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf92.fna.gz | Leaf92.faa.gz | Leaf92.ffn.gz | Leaf92.gff.gz |
Leaf93 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf93.fna.gz | Leaf93.faa.gz | Leaf93.ffn.gz | Leaf93.gff.gz |
Leaf94 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf94.fna.gz | Leaf94.faa.gz | Leaf94.ffn.gz | Leaf94.gff.gz |
Leaf99 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | Arabidopsis thaliana | Leaf | Leaf99.fna.gz | Leaf99.faa.gz | Leaf99.ffn.gz | Leaf99.gff.gz |
LjNodule209 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule209.fna.gz | LjNodule209.faa.gz | LjNodule209.ffn.gz | LjNodule209.gff.gz |
LjNodule210 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule210.fna.gz | LjNodule210.faa.gz | LjNodule210.ffn.gz | LjNodule210.gff.gz |
LjNodule211 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule211.fna.gz | LjNodule211.faa.gz | LjNodule211.ffn.gz | LjNodule211.gff.gz |
LjNodule212 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule212.fna.gz | LjNodule212.faa.gz | LjNodule212.ffn.gz | LjNodule212.gff.gz |
LjNodule213 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule213.fna.gz | LjNodule213.faa.gz | LjNodule213.ffn.gz | LjNodule213.gff.gz |
LjNodule214 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule214.fna.gz | LjNodule214.faa.gz | LjNodule214.ffn.gz | LjNodule214.gff.gz |
LjNodule215 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule215.fna.gz | LjNodule215.faa.gz | LjNodule215.ffn.gz | LjNodule215.gff.gz |
LjNodule217 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule217.fna.gz | LjNodule217.faa.gz | LjNodule217.ffn.gz | LjNodule217.gff.gz |
LjNodule218 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule218.fna.gz | LjNodule218.faa.gz | LjNodule218.ffn.gz | LjNodule218.gff.gz |
LjRoot1 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Lotus japonicus | Root | LjRoot1.fna.gz | LjRoot1.faa.gz | LjRoot1.ffn.gz | LjRoot1.gff.gz |
LjRoot10 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot10.fna.gz | LjRoot10.faa.gz | LjRoot10.ffn.gz | LjRoot10.gff.gz |
LjRoot101 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot101.fna.gz | LjRoot101.faa.gz | LjRoot101.ffn.gz | LjRoot101.gff.gz |
LjRoot102 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot102.fna.gz | LjRoot102.faa.gz | LjRoot102.ffn.gz | LjRoot102.gff.gz |