Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot196 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot196.fna.gz | LjRoot196.faa.gz | LjRoot196.ffn.gz | LjRoot196.gff.gz |
LjRoot197 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot197.fna.gz | LjRoot197.faa.gz | LjRoot197.ffn.gz | LjRoot197.gff.gz |
LjRoot198 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot198.fna.gz | LjRoot198.faa.gz | LjRoot198.ffn.gz | LjRoot198.gff.gz |
LjRoot199 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot199.fna.gz | LjRoot199.faa.gz | LjRoot199.ffn.gz | LjRoot199.gff.gz |
LjRoot200 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot200.fna.gz | LjRoot200.faa.gz | LjRoot200.ffn.gz | LjRoot200.gff.gz |
LjRoot201 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot201.fna.gz | LjRoot201.faa.gz | LjRoot201.ffn.gz | LjRoot201.gff.gz |
LjRoot202 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot202.fna.gz | LjRoot202.faa.gz | LjRoot202.ffn.gz | LjRoot202.gff.gz |
LjRoot203 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot203.fna.gz | LjRoot203.faa.gz | LjRoot203.ffn.gz | LjRoot203.gff.gz |
LjRoot219 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot219.fna.gz | LjRoot219.faa.gz | LjRoot219.ffn.gz | LjRoot219.gff.gz |
LjRoot220 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot220.fna.gz | LjRoot220.faa.gz | LjRoot220.ffn.gz | LjRoot220.gff.gz |
LjRoot221 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot221.fna.gz | LjRoot221.faa.gz | LjRoot221.ffn.gz | LjRoot221.gff.gz |
LjRoot222 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Lotus japonicus | Root | LjRoot222.fna.gz | LjRoot222.faa.gz | LjRoot222.ffn.gz | LjRoot222.gff.gz |
LjRoot223 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot223.fna.gz | LjRoot223.faa.gz | LjRoot223.ffn.gz | LjRoot223.gff.gz |
LjRoot224 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot224.fna.gz | LjRoot224.faa.gz | LjRoot224.ffn.gz | LjRoot224.gff.gz |
LjRoot225 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot225.fna.gz | LjRoot225.faa.gz | LjRoot225.ffn.gz | LjRoot225.gff.gz |
LjRoot226 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Lotus japonicus | Root | LjRoot226.fna.gz | LjRoot226.faa.gz | LjRoot226.ffn.gz | LjRoot226.gff.gz |
LjRoot227 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Lotus japonicus | Root | LjRoot227.fna.gz | LjRoot227.faa.gz | LjRoot227.ffn.gz | LjRoot227.gff.gz |
LjRoot228 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot228.fna.gz | LjRoot228.faa.gz | LjRoot228.ffn.gz | LjRoot228.gff.gz |
LjRoot229 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot229.fna.gz | LjRoot229.faa.gz | LjRoot229.ffn.gz | LjRoot229.gff.gz |
LjRoot230 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot230.fna.gz | LjRoot230.faa.gz | LjRoot230.ffn.gz | LjRoot230.gff.gz |
LjRoot231 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot231.fna.gz | LjRoot231.faa.gz | LjRoot231.ffn.gz | LjRoot231.gff.gz |
LjRoot232 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot232.fna.gz | LjRoot232.faa.gz | LjRoot232.ffn.gz | LjRoot232.gff.gz |
LjRoot233 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot233.fna.gz | LjRoot233.faa.gz | LjRoot233.ffn.gz | LjRoot233.gff.gz |
LjRoot234 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot234.fna.gz | LjRoot234.faa.gz | LjRoot234.ffn.gz | LjRoot234.gff.gz |
LjRoot235 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot235.fna.gz | LjRoot235.faa.gz | LjRoot235.ffn.gz | LjRoot235.gff.gz |
LjRoot236 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot236.fna.gz | LjRoot236.faa.gz | LjRoot236.ffn.gz | LjRoot236.gff.gz |
LjRoot237 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot237.fna.gz | LjRoot237.faa.gz | LjRoot237.ffn.gz | LjRoot237.gff.gz |
LjRoot238 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot238.fna.gz | LjRoot238.faa.gz | LjRoot238.ffn.gz | LjRoot238.gff.gz |
LjRoot239 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot239.fna.gz | LjRoot239.faa.gz | LjRoot239.ffn.gz | LjRoot239.gff.gz |
LjRoot240 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot240.fna.gz | LjRoot240.faa.gz | LjRoot240.ffn.gz | LjRoot240.gff.gz |
LjRoot241 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot241.fna.gz | LjRoot241.faa.gz | LjRoot241.ffn.gz | LjRoot241.gff.gz |
LjRoot243 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot243.fna.gz | LjRoot243.faa.gz | LjRoot243.ffn.gz | LjRoot243.gff.gz |
LjRoot244 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot244.fna.gz | LjRoot244.faa.gz | LjRoot244.ffn.gz | LjRoot244.gff.gz |
LjRoot245 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot245.fna.gz | LjRoot245.faa.gz | LjRoot245.ffn.gz | LjRoot245.gff.gz |
LjRoot246 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot246.fna.gz | LjRoot246.faa.gz | LjRoot246.ffn.gz | LjRoot246.gff.gz |
LjRoot247 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot247.fna.gz | LjRoot247.faa.gz | LjRoot247.ffn.gz | LjRoot247.gff.gz |
LjRoot248 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot248.fna.gz | LjRoot248.faa.gz | LjRoot248.ffn.gz | LjRoot248.gff.gz |
LjRoot249 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot249.fna.gz | LjRoot249.faa.gz | LjRoot249.ffn.gz | LjRoot249.gff.gz |
LjRoot250 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot250.fna.gz | LjRoot250.faa.gz | LjRoot250.ffn.gz | LjRoot250.gff.gz |
LjRoot251 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot251.fna.gz | LjRoot251.faa.gz | LjRoot251.ffn.gz | LjRoot251.gff.gz |
LjRoot252 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot252.fna.gz | LjRoot252.faa.gz | LjRoot252.ffn.gz | LjRoot252.gff.gz |
LjRoot253 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot253.fna.gz | LjRoot253.faa.gz | LjRoot253.ffn.gz | LjRoot253.gff.gz |
LjRoot254 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot254.fna.gz | LjRoot254.faa.gz | LjRoot254.ffn.gz | LjRoot254.gff.gz |
LjRoot255 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot255.fna.gz | LjRoot255.faa.gz | LjRoot255.ffn.gz | LjRoot255.gff.gz |
LjRoot256 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot256.fna.gz | LjRoot256.faa.gz | LjRoot256.ffn.gz | LjRoot256.gff.gz |
LjRoot257 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot257.fna.gz | LjRoot257.faa.gz | LjRoot257.ffn.gz | LjRoot257.gff.gz |
LjRoot258 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot258.fna.gz | LjRoot258.faa.gz | LjRoot258.ffn.gz | LjRoot258.gff.gz |
LjRoot259 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot259.fna.gz | LjRoot259.faa.gz | LjRoot259.ffn.gz | LjRoot259.gff.gz |
LjRoot260 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot260.fna.gz | LjRoot260.faa.gz | LjRoot260.ffn.gz | LjRoot260.gff.gz |
LjRoot261 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot261.fna.gz | LjRoot261.faa.gz | LjRoot261.ffn.gz | LjRoot261.gff.gz |