Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
Root695 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root695.fna.gz | Root695.faa.gz | Root695.ffn.gz | Root695.gff.gz |
Root1471 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Arabidopsis thaliana | Root | Root1471.fna.gz | Root1471.faa.gz | Root1471.ffn.gz | Root1471.gff.gz |
LjRoot228 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot228.fna.gz | LjRoot228.faa.gz | LjRoot228.ffn.gz | LjRoot228.gff.gz |
LjRoot231 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot231.fna.gz | LjRoot231.faa.gz | LjRoot231.ffn.gz | LjRoot231.gff.gz |
LjRoot234 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot234.fna.gz | LjRoot234.faa.gz | LjRoot234.ffn.gz | LjRoot234.gff.gz |
LjRoot244 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot244.fna.gz | LjRoot244.faa.gz | LjRoot244.ffn.gz | LjRoot244.gff.gz |
LjRoot246 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot246.fna.gz | LjRoot246.faa.gz | LjRoot246.ffn.gz | LjRoot246.gff.gz |
LjNodule209 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule209.fna.gz | LjNodule209.faa.gz | LjNodule209.ffn.gz | LjNodule209.gff.gz |
LjNodule210 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule210.fna.gz | LjNodule210.faa.gz | LjNodule210.ffn.gz | LjNodule210.gff.gz |
LjNodule211 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule211.fna.gz | LjNodule211.faa.gz | LjNodule211.ffn.gz | LjNodule211.gff.gz |
LjNodule212 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule212.fna.gz | LjNodule212.faa.gz | LjNodule212.ffn.gz | LjNodule212.gff.gz |
LjNodule213 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule213.fna.gz | LjNodule213.faa.gz | LjNodule213.ffn.gz | LjNodule213.gff.gz |
LjNodule214 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule214.fna.gz | LjNodule214.faa.gz | LjNodule214.ffn.gz | LjNodule214.gff.gz |
LjNodule215 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule215.fna.gz | LjNodule215.faa.gz | LjNodule215.ffn.gz | LjNodule215.gff.gz |
LjNodule217 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule217.fna.gz | LjNodule217.faa.gz | LjNodule217.ffn.gz | LjNodule217.gff.gz |
LjNodule218 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule218.fna.gz | LjNodule218.faa.gz | LjNodule218.ffn.gz | LjNodule218.gff.gz |
Leaf72 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Leaf | Leaf72.fna.gz | Leaf72.faa.gz | Leaf72.ffn.gz | Leaf72.gff.gz |
Root52 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Root | Root52.fna.gz | Root52.faa.gz | Root52.ffn.gz | Root52.gff.gz |
Leaf182 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Leaf | Leaf182.fna.gz | Leaf182.faa.gz | Leaf182.ffn.gz | Leaf182.gff.gz |
Soil522 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Soil | Soil | Soil522.fna.gz | Soil522.faa.gz | Soil522.ffn.gz | Soil522.gff.gz |