Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot135 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot135.fna.gz | LjRoot135.faa.gz | LjRoot135.ffn.gz | LjRoot135.gff.gz |
LjRoot138 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot138.fna.gz | LjRoot138.faa.gz | LjRoot138.ffn.gz | LjRoot138.gff.gz |
LjRoot139 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot139.fna.gz | LjRoot139.faa.gz | LjRoot139.ffn.gz | LjRoot139.gff.gz |
LjRoot140 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot140.fna.gz | LjRoot140.faa.gz | LjRoot140.ffn.gz | LjRoot140.gff.gz |
LjRoot141 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot141.fna.gz | LjRoot141.faa.gz | LjRoot141.ffn.gz | LjRoot141.gff.gz |
LjRoot142 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot142.fna.gz | LjRoot142.faa.gz | LjRoot142.ffn.gz | LjRoot142.gff.gz |
LjRoot143 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot143.fna.gz | LjRoot143.faa.gz | LjRoot143.ffn.gz | LjRoot143.gff.gz |
LjRoot144 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot144.fna.gz | LjRoot144.faa.gz | LjRoot144.ffn.gz | LjRoot144.gff.gz |
LjRoot145 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot145.fna.gz | LjRoot145.faa.gz | LjRoot145.ffn.gz | LjRoot145.gff.gz |
LjRoot147 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot147.fna.gz | LjRoot147.faa.gz | LjRoot147.ffn.gz | LjRoot147.gff.gz |
LjRoot148 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot148.fna.gz | LjRoot148.faa.gz | LjRoot148.ffn.gz | LjRoot148.gff.gz |
LjRoot149 | LjSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Lotus japonicus | Root | LjRoot149.fna.gz | LjRoot149.faa.gz | LjRoot149.ffn.gz | LjRoot149.gff.gz |
LjRoot150 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot150.fna.gz | LjRoot150.faa.gz | LjRoot150.ffn.gz | LjRoot150.gff.gz |
LjRoot151 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot151.fna.gz | LjRoot151.faa.gz | LjRoot151.ffn.gz | LjRoot151.gff.gz |
LjRoot152 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot152.fna.gz | LjRoot152.faa.gz | LjRoot152.ffn.gz | LjRoot152.gff.gz |
LjRoot153 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Lotus japonicus | Root | LjRoot153.fna.gz | LjRoot153.faa.gz | LjRoot153.ffn.gz | LjRoot153.gff.gz |
LjRoot154 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot154.fna.gz | LjRoot154.faa.gz | LjRoot154.ffn.gz | LjRoot154.gff.gz |
LjRoot156 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot156.fna.gz | LjRoot156.faa.gz | LjRoot156.ffn.gz | LjRoot156.gff.gz |
LjRoot157 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot157.fna.gz | LjRoot157.faa.gz | LjRoot157.ffn.gz | LjRoot157.gff.gz |
LjRoot158 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot158.fna.gz | LjRoot158.faa.gz | LjRoot158.ffn.gz | LjRoot158.gff.gz |
LjRoot159 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot159.fna.gz | LjRoot159.faa.gz | LjRoot159.ffn.gz | LjRoot159.gff.gz |
LjRoot160 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot160.fna.gz | LjRoot160.faa.gz | LjRoot160.ffn.gz | LjRoot160.gff.gz |
LjRoot161 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot161.fna.gz | LjRoot161.faa.gz | LjRoot161.ffn.gz | LjRoot161.gff.gz |
LjRoot162 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot162.fna.gz | LjRoot162.faa.gz | LjRoot162.ffn.gz | LjRoot162.gff.gz |
LjRoot165 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot165.fna.gz | LjRoot165.faa.gz | LjRoot165.ffn.gz | LjRoot165.gff.gz |
LjRoot166 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot166.fna.gz | LjRoot166.faa.gz | LjRoot166.ffn.gz | LjRoot166.gff.gz |
LjRoot167 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot167.fna.gz | LjRoot167.faa.gz | LjRoot167.ffn.gz | LjRoot167.gff.gz |
LjRoot170 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot170.fna.gz | LjRoot170.faa.gz | LjRoot170.ffn.gz | LjRoot170.gff.gz |
LjRoot171 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot171.fna.gz | LjRoot171.faa.gz | LjRoot171.ffn.gz | LjRoot171.gff.gz |
LjRoot172 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot172.fna.gz | LjRoot172.faa.gz | LjRoot172.ffn.gz | LjRoot172.gff.gz |
LjRoot173 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot173.fna.gz | LjRoot173.faa.gz | LjRoot173.ffn.gz | LjRoot173.gff.gz |
LjRoot175 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot175.fna.gz | LjRoot175.faa.gz | LjRoot175.ffn.gz | LjRoot175.gff.gz |
LjRoot176 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot176.fna.gz | LjRoot176.faa.gz | LjRoot176.ffn.gz | LjRoot176.gff.gz |
LjRoot177 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Lotus japonicus | Root | LjRoot177.fna.gz | LjRoot177.faa.gz | LjRoot177.ffn.gz | LjRoot177.gff.gz |
LjRoot178 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot178.fna.gz | LjRoot178.faa.gz | LjRoot178.ffn.gz | LjRoot178.gff.gz |
LjRoot179 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot179.fna.gz | LjRoot179.faa.gz | LjRoot179.ffn.gz | LjRoot179.gff.gz |
LjRoot180 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot180.fna.gz | LjRoot180.faa.gz | LjRoot180.ffn.gz | LjRoot180.gff.gz |
LjRoot181 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot181.fna.gz | LjRoot181.faa.gz | LjRoot181.ffn.gz | LjRoot181.gff.gz |
LjRoot182 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot182.fna.gz | LjRoot182.faa.gz | LjRoot182.ffn.gz | LjRoot182.gff.gz |
LjRoot183 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot183.fna.gz | LjRoot183.faa.gz | LjRoot183.ffn.gz | LjRoot183.gff.gz |
LjRoot184 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Lotus japonicus | Root | LjRoot184.fna.gz | LjRoot184.faa.gz | LjRoot184.ffn.gz | LjRoot184.gff.gz |
LjRoot186 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot186.fna.gz | LjRoot186.faa.gz | LjRoot186.ffn.gz | LjRoot186.gff.gz |
LjRoot187 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot187.fna.gz | LjRoot187.faa.gz | LjRoot187.ffn.gz | LjRoot187.gff.gz |
LjRoot188 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot188.fna.gz | LjRoot188.faa.gz | LjRoot188.ffn.gz | LjRoot188.gff.gz |
LjRoot189 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot189.fna.gz | LjRoot189.faa.gz | LjRoot189.ffn.gz | LjRoot189.gff.gz |
LjRoot191 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot191.fna.gz | LjRoot191.faa.gz | LjRoot191.ffn.gz | LjRoot191.gff.gz |
LjRoot192 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot192.fna.gz | LjRoot192.faa.gz | LjRoot192.ffn.gz | LjRoot192.gff.gz |
LjRoot193 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot193.fna.gz | LjRoot193.faa.gz | LjRoot193.ffn.gz | LjRoot193.gff.gz |
LjRoot194 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot194.fna.gz | LjRoot194.faa.gz | LjRoot194.ffn.gz | LjRoot194.gff.gz |
LjRoot195 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot195.fna.gz | LjRoot195.faa.gz | LjRoot195.ffn.gz | LjRoot195.gff.gz |