Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
---|---|---|---|---|---|---|---|---|---|---|---|
LjRoot88 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot88.fna.gz | LjRoot88.faa.gz | LjRoot88.ffn.gz | LjRoot88.gff.gz |
LjRoot90 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot90.fna.gz | LjRoot90.faa.gz | LjRoot90.ffn.gz | LjRoot90.gff.gz |
LjRoot91 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot91.fna.gz | LjRoot91.faa.gz | LjRoot91.ffn.gz | LjRoot91.gff.gz |
LjRoot92 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot92.fna.gz | LjRoot92.faa.gz | LjRoot92.ffn.gz | LjRoot92.gff.gz |
LjRoot93 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot93.fna.gz | LjRoot93.faa.gz | LjRoot93.ffn.gz | LjRoot93.gff.gz |
LjRoot94 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot94.fna.gz | LjRoot94.faa.gz | LjRoot94.ffn.gz | LjRoot94.gff.gz |
LjRoot95 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot95.fna.gz | LjRoot95.faa.gz | LjRoot95.ffn.gz | LjRoot95.gff.gz |
LjRoot96 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot96.fna.gz | LjRoot96.faa.gz | LjRoot96.ffn.gz | LjRoot96.gff.gz |
LjRoot97 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot97.fna.gz | LjRoot97.faa.gz | LjRoot97.ffn.gz | LjRoot97.gff.gz |
LjRoot98 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot98.fna.gz | LjRoot98.faa.gz | LjRoot98.ffn.gz | LjRoot98.gff.gz |
LjRoot99 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot99.fna.gz | LjRoot99.faa.gz | LjRoot99.ffn.gz | LjRoot99.gff.gz |
LjRoot101 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot101.fna.gz | LjRoot101.faa.gz | LjRoot101.ffn.gz | LjRoot101.gff.gz |
LjRoot102 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot102.fna.gz | LjRoot102.faa.gz | LjRoot102.ffn.gz | LjRoot102.gff.gz |
LjRoot103 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot103.fna.gz | LjRoot103.faa.gz | LjRoot103.ffn.gz | LjRoot103.gff.gz |
LjRoot104 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot104.fna.gz | LjRoot104.faa.gz | LjRoot104.ffn.gz | LjRoot104.gff.gz |
LjRoot105 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot105.fna.gz | LjRoot105.faa.gz | LjRoot105.ffn.gz | LjRoot105.gff.gz |
LjRoot107 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot107.fna.gz | LjRoot107.faa.gz | LjRoot107.ffn.gz | LjRoot107.gff.gz |
LjRoot109 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot109.fna.gz | LjRoot109.faa.gz | LjRoot109.ffn.gz | LjRoot109.gff.gz |
LjRoot111 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot111.fna.gz | LjRoot111.faa.gz | LjRoot111.ffn.gz | LjRoot111.gff.gz |
LjRoot117 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot117.fna.gz | LjRoot117.faa.gz | LjRoot117.ffn.gz | LjRoot117.gff.gz |
LjRoot118 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot118.fna.gz | LjRoot118.faa.gz | LjRoot118.ffn.gz | LjRoot118.gff.gz |
LjRoot120 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot120.fna.gz | LjRoot120.faa.gz | LjRoot120.ffn.gz | LjRoot120.gff.gz |
LjRoot121 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot121.fna.gz | LjRoot121.faa.gz | LjRoot121.ffn.gz | LjRoot121.gff.gz |
LjRoot122 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot122.fna.gz | LjRoot122.faa.gz | LjRoot122.ffn.gz | LjRoot122.gff.gz |
LjRoot124 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot124.fna.gz | LjRoot124.faa.gz | LjRoot124.ffn.gz | LjRoot124.gff.gz |
LjRoot125 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot125.fna.gz | LjRoot125.faa.gz | LjRoot125.ffn.gz | LjRoot125.gff.gz |
LjRoot126 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot126.fna.gz | LjRoot126.faa.gz | LjRoot126.ffn.gz | LjRoot126.gff.gz |
LjRoot129 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot129.fna.gz | LjRoot129.faa.gz | LjRoot129.ffn.gz | LjRoot129.gff.gz |
LjRoot130 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot130.fna.gz | LjRoot130.faa.gz | LjRoot130.ffn.gz | LjRoot130.gff.gz |
LjRoot131 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot131.fna.gz | LjRoot131.faa.gz | LjRoot131.ffn.gz | LjRoot131.gff.gz |
LjRoot133 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot133.fna.gz | LjRoot133.faa.gz | LjRoot133.ffn.gz | LjRoot133.gff.gz |
LjRoot134 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot134.fna.gz | LjRoot134.faa.gz | LjRoot134.ffn.gz | LjRoot134.gff.gz |
LjRoot135 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot135.fna.gz | LjRoot135.faa.gz | LjRoot135.ffn.gz | LjRoot135.gff.gz |
LjRoot138 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot138.fna.gz | LjRoot138.faa.gz | LjRoot138.ffn.gz | LjRoot138.gff.gz |
LjRoot139 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot139.fna.gz | LjRoot139.faa.gz | LjRoot139.ffn.gz | LjRoot139.gff.gz |
LjRoot140 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot140.fna.gz | LjRoot140.faa.gz | LjRoot140.ffn.gz | LjRoot140.gff.gz |
LjRoot141 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot141.fna.gz | LjRoot141.faa.gz | LjRoot141.ffn.gz | LjRoot141.gff.gz |
LjRoot142 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot142.fna.gz | LjRoot142.faa.gz | LjRoot142.ffn.gz | LjRoot142.gff.gz |
LjRoot143 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot143.fna.gz | LjRoot143.faa.gz | LjRoot143.ffn.gz | LjRoot143.gff.gz |
LjRoot144 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot144.fna.gz | LjRoot144.faa.gz | LjRoot144.ffn.gz | LjRoot144.gff.gz |
LjRoot145 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot145.fna.gz | LjRoot145.faa.gz | LjRoot145.ffn.gz | LjRoot145.gff.gz |
LjRoot147 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot147.fna.gz | LjRoot147.faa.gz | LjRoot147.ffn.gz | LjRoot147.gff.gz |
LjRoot148 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot148.fna.gz | LjRoot148.faa.gz | LjRoot148.ffn.gz | LjRoot148.gff.gz |
LjRoot149 | LjSPHERE | Bacteroidetes | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Lotus japonicus | Root | LjRoot149.fna.gz | LjRoot149.faa.gz | LjRoot149.ffn.gz | LjRoot149.gff.gz |
LjRoot150 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot150.fna.gz | LjRoot150.faa.gz | LjRoot150.ffn.gz | LjRoot150.gff.gz |
LjRoot151 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot151.fna.gz | LjRoot151.faa.gz | LjRoot151.ffn.gz | LjRoot151.gff.gz |
LjRoot152 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot152.fna.gz | LjRoot152.faa.gz | LjRoot152.ffn.gz | LjRoot152.gff.gz |
LjRoot153 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Lotus japonicus | Root | LjRoot153.fna.gz | LjRoot153.faa.gz | LjRoot153.ffn.gz | LjRoot153.gff.gz |
LjRoot154 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot154.fna.gz | LjRoot154.faa.gz | LjRoot154.ffn.gz | LjRoot154.gff.gz |
LjRoot156 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot156.fna.gz | LjRoot156.faa.gz | LjRoot156.ffn.gz | LjRoot156.gff.gz |