| Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| LjRoot294 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot294.fna.gz | LjRoot294.faa.gz | LjRoot294.ffn.gz | LjRoot294.gff.gz |
| LjRoot295 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot295.fna.gz | LjRoot295.faa.gz | LjRoot295.ffn.gz | LjRoot295.gff.gz |
| LjRoot296 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot296.fna.gz | LjRoot296.faa.gz | LjRoot296.ffn.gz | LjRoot296.gff.gz |
| LjRoot297 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot297.fna.gz | LjRoot297.faa.gz | LjRoot297.ffn.gz | LjRoot297.gff.gz |
| LjRoot298 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot298.fna.gz | LjRoot298.faa.gz | LjRoot298.ffn.gz | LjRoot298.gff.gz |
| LjRoot299 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot299.fna.gz | LjRoot299.faa.gz | LjRoot299.ffn.gz | LjRoot299.gff.gz |
| LjRoot300 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot300.fna.gz | LjRoot300.faa.gz | LjRoot300.ffn.gz | LjRoot300.gff.gz |
| LjRoot301 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot301.fna.gz | LjRoot301.faa.gz | LjRoot301.ffn.gz | LjRoot301.gff.gz |
| LjRoot302 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot302.fna.gz | LjRoot302.faa.gz | LjRoot302.ffn.gz | LjRoot302.gff.gz |
| LjRoot303 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot303.fna.gz | LjRoot303.faa.gz | LjRoot303.ffn.gz | LjRoot303.gff.gz |
| LjRoot304 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot304.fna.gz | LjRoot304.faa.gz | LjRoot304.ffn.gz | LjRoot304.gff.gz |
| LjRoot305 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot305.fna.gz | LjRoot305.faa.gz | LjRoot305.ffn.gz | LjRoot305.gff.gz |
| LjRoot306 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot306.fna.gz | LjRoot306.faa.gz | LjRoot306.ffn.gz | LjRoot306.gff.gz |
| LjRoot307 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Streptomycetaceae | Lotus japonicus | Root | LjRoot307.fna.gz | LjRoot307.faa.gz | LjRoot307.ffn.gz | LjRoot307.gff.gz |
| Root112D2 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root112D2.fna.gz | Root112D2.faa.gz | Root112D2.ffn.gz | Root112D2.gff.gz |
| Root123D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root123D2.fna.gz | Root123D2.faa.gz | Root123D2.ffn.gz | Root123D2.gff.gz |
| Root198D2 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root198D2.fna.gz | Root198D2.faa.gz | Root198D2.ffn.gz | Root198D2.gff.gz |
| Root280D1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root280D1.fna.gz | Root280D1.faa.gz | Root280D1.ffn.gz | Root280D1.gff.gz |
| Root318D1 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Arabidopsis thaliana | Root | Root318D1.fna.gz | Root318D1.faa.gz | Root318D1.ffn.gz | Root318D1.gff.gz |
| Root336D2 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root336D2.fna.gz | Root336D2.faa.gz | Root336D2.ffn.gz | Root336D2.gff.gz |
| Root413D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Arabidopsis thaliana | Root | Root413D1.fna.gz | Root413D1.faa.gz | Root413D1.ffn.gz | Root413D1.gff.gz |
| Root444D2 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Arabidopsis thaliana | Root | Root444D2.fna.gz | Root444D2.faa.gz | Root444D2.ffn.gz | Root444D2.gff.gz |
| Root472D3 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Nocardioidaceae | Arabidopsis thaliana | Root | Root472D3.fna.gz | Root472D3.faa.gz | Root472D3.ffn.gz | Root472D3.gff.gz |
| Root483D1 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Arabidopsis thaliana | Root | Root483D1.fna.gz | Root483D1.faa.gz | Root483D1.ffn.gz | Root483D1.gff.gz |
| Root483D2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Arabidopsis thaliana | Root | Root483D2.fna.gz | Root483D2.faa.gz | Root483D2.ffn.gz | Root483D2.gff.gz |
| Root1433D1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Root | Root1433D1.fna.gz | Root1433D1.faa.gz | Root1433D1.ffn.gz | Root1433D1.gff.gz |
| Root1480D1 | AtSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Arabidopsis thaliana | Root | Root1480D1.fna.gz | Root1480D1.faa.gz | Root1480D1.ffn.gz | Root1480D1.gff.gz |
| Root487D2Y | AtSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Arabidopsis thaliana | Root | Root487D2Y.fna.gz | Root487D2Y.faa.gz | Root487D2Y.ffn.gz | Root487D2Y.gff.gz |
| LjNodule209 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule209.fna.gz | LjNodule209.faa.gz | LjNodule209.ffn.gz | LjNodule209.gff.gz |
| LjNodule210 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule210.fna.gz | LjNodule210.faa.gz | LjNodule210.ffn.gz | LjNodule210.gff.gz |
| LjNodule211 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule211.fna.gz | LjNodule211.faa.gz | LjNodule211.ffn.gz | LjNodule211.gff.gz |
| LjNodule212 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule212.fna.gz | LjNodule212.faa.gz | LjNodule212.ffn.gz | LjNodule212.gff.gz |
| LjNodule213 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule213.fna.gz | LjNodule213.faa.gz | LjNodule213.ffn.gz | LjNodule213.gff.gz |
| LjNodule214 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule214.fna.gz | LjNodule214.faa.gz | LjNodule214.ffn.gz | LjNodule214.gff.gz |
| LjNodule215 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule215.fna.gz | LjNodule215.faa.gz | LjNodule215.ffn.gz | LjNodule215.gff.gz |
| LjNodule217 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule217.fna.gz | LjNodule217.faa.gz | LjNodule217.ffn.gz | LjNodule217.gff.gz |
| LjNodule218 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Nodule | LjNodule218.fna.gz | LjNodule218.faa.gz | LjNodule218.ffn.gz | LjNodule218.gff.gz |
| Leaf1 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf1.fna.gz | Leaf1.faa.gz | Leaf1.ffn.gz | Leaf1.gff.gz |
| Leaf2 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf2.fna.gz | Leaf2.faa.gz | Leaf2.ffn.gz | Leaf2.gff.gz |
| Leaf3 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Arabidopsis thaliana | Leaf | Leaf3.fna.gz | Leaf3.faa.gz | Leaf3.ffn.gz | Leaf3.gff.gz |
| Leaf5 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf5.fna.gz | Leaf5.faa.gz | Leaf5.ffn.gz | Leaf5.gff.gz |
| Leaf7 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Nocardiaceae | Arabidopsis thaliana | Leaf | Leaf7.fna.gz | Leaf7.faa.gz | Leaf7.ffn.gz | Leaf7.gff.gz |
| Leaf8 | AtSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Arabidopsis thaliana | Leaf | Leaf8.fna.gz | Leaf8.faa.gz | Leaf8.ffn.gz | Leaf8.gff.gz |
| Leaf9 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf9.fna.gz | Leaf9.faa.gz | Leaf9.ffn.gz | Leaf9.gff.gz |
| Leaf10 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf10.fna.gz | Leaf10.faa.gz | Leaf10.ffn.gz | Leaf10.gff.gz |
| Leaf11 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf11.fna.gz | Leaf11.faa.gz | Leaf11.ffn.gz | Leaf11.gff.gz |
| Leaf13 | AtSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Arabidopsis thaliana | Leaf | Leaf13.fna.gz | Leaf13.faa.gz | Leaf13.ffn.gz | Leaf13.gff.gz |
| Leaf15 | AtSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Arabidopsis thaliana | Leaf | Leaf15.fna.gz | Leaf15.faa.gz | Leaf15.ffn.gz | Leaf15.gff.gz |
| Leaf16 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf16.fna.gz | Leaf16.faa.gz | Leaf16.ffn.gz | Leaf16.gff.gz |
| Leaf17 | AtSPHERE | Proteobacteria | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Arabidopsis thaliana | Leaf | Leaf17.fna.gz | Leaf17.faa.gz | Leaf17.ffn.gz | Leaf17.gff.gz |