Culture Collection Overview

Strain ID	Collection ID	Phylum	Class	Order	Family	Host	Environment	Assemblies	ORFs AA	ORFs NT	GFFs
LjRoot52	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Bradyrhizobiaceae	Lotus japonicus	Root	LjRoot52.fna.gz	LjRoot52.faa.gz	LjRoot52.ffn.gz	LjRoot52.gff.gz
LjRoot53	LjSPHERE	Firmicutes	Bacilli	Bacillales	Bacillaceae	Lotus japonicus	Root	LjRoot53.fna.gz	LjRoot53.faa.gz	LjRoot53.ffn.gz	LjRoot53.gff.gz
LjRoot54	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot54.fna.gz	LjRoot54.faa.gz	LjRoot54.ffn.gz	LjRoot54.gff.gz
LjRoot59	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot59.fna.gz	LjRoot59.faa.gz	LjRoot59.ffn.gz	LjRoot59.gff.gz
LjRoot6	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot6.fna.gz	LjRoot6.faa.gz	LjRoot6.ffn.gz	LjRoot6.gff.gz
LjRoot60	LjSPHERE	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Lotus japonicus	Root	LjRoot60.fna.gz	LjRoot60.faa.gz	LjRoot60.ffn.gz	LjRoot60.gff.gz
LjRoot62	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot62.fna.gz	LjRoot62.faa.gz	LjRoot62.ffn.gz	LjRoot62.gff.gz
LjRoot63	LjSPHERE	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Lotus japonicus	Root	LjRoot63.fna.gz	LjRoot63.faa.gz	LjRoot63.ffn.gz	LjRoot63.gff.gz
LjRoot65	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot65.fna.gz	LjRoot65.faa.gz	LjRoot65.ffn.gz	LjRoot65.gff.gz
LjRoot66	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot66.fna.gz	LjRoot66.faa.gz	LjRoot66.ffn.gz	LjRoot66.gff.gz
LjRoot67	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot67.fna.gz	LjRoot67.faa.gz	LjRoot67.ffn.gz	LjRoot67.gff.gz
LjRoot68	LjSPHERE	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Lotus japonicus	Root	LjRoot68.fna.gz	LjRoot68.faa.gz	LjRoot68.ffn.gz	LjRoot68.gff.gz
LjRoot69	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot69.fna.gz	LjRoot69.faa.gz	LjRoot69.ffn.gz	LjRoot69.gff.gz
LjRoot7	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Phyllobacteriaceae	Lotus japonicus	Root	LjRoot7.fna.gz	LjRoot7.faa.gz	LjRoot7.ffn.gz	LjRoot7.gff.gz
LjRoot70	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot70.fna.gz	LjRoot70.faa.gz	LjRoot70.ffn.gz	LjRoot70.gff.gz
LjRoot71	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot71.fna.gz	LjRoot71.faa.gz	LjRoot71.ffn.gz	LjRoot71.gff.gz
LjRoot72	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot72.fna.gz	LjRoot72.faa.gz	LjRoot72.ffn.gz	LjRoot72.gff.gz
LjRoot73	LjSPHERE	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Lotus japonicus	Root	LjRoot73.fna.gz	LjRoot73.faa.gz	LjRoot73.ffn.gz	LjRoot73.gff.gz
LjRoot74	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot74.fna.gz	LjRoot74.faa.gz	LjRoot74.ffn.gz	LjRoot74.gff.gz
LjRoot75	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot75.fna.gz	LjRoot75.faa.gz	LjRoot75.ffn.gz	LjRoot75.gff.gz
LjRoot76	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot76.fna.gz	LjRoot76.faa.gz	LjRoot76.ffn.gz	LjRoot76.gff.gz
LjRoot77	LjSPHERE	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Lotus japonicus	Root	LjRoot77.fna.gz	LjRoot77.faa.gz	LjRoot77.ffn.gz	LjRoot77.gff.gz
LjRoot78	LjSPHERE	Actinobacteria	Actinobacteria	Actinomycetales	Micrococcaceae	Lotus japonicus	Root	LjRoot78.fna.gz	LjRoot78.faa.gz	LjRoot78.ffn.gz	LjRoot78.gff.gz
LjRoot79	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot79.fna.gz	LjRoot79.faa.gz	LjRoot79.ffn.gz	LjRoot79.gff.gz
LjRoot80	LjSPHERE	Actinobacteria	Actinobacteria	Actinomycetales	Mycobacteriaceae	Lotus japonicus	Root	LjRoot80.fna.gz	LjRoot80.faa.gz	LjRoot80.ffn.gz	LjRoot80.gff.gz
LjRoot82	LjSPHERE	Bacteroidetes	Flavobacteriia	Flavobacteriales	Flavobacteriaceae	Lotus japonicus	Root	LjRoot82.fna.gz	LjRoot82.faa.gz	LjRoot82.ffn.gz	LjRoot82.gff.gz
LjRoot83	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot83.fna.gz	LjRoot83.faa.gz	LjRoot83.ffn.gz	LjRoot83.gff.gz
LjRoot84	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot84.fna.gz	LjRoot84.faa.gz	LjRoot84.ffn.gz	LjRoot84.gff.gz
LjRoot85	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot85.fna.gz	LjRoot85.faa.gz	LjRoot85.ffn.gz	LjRoot85.gff.gz
LjRoot86	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot86.fna.gz	LjRoot86.faa.gz	LjRoot86.ffn.gz	LjRoot86.gff.gz
LjRoot87	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot87.fna.gz	LjRoot87.faa.gz	LjRoot87.ffn.gz	LjRoot87.gff.gz
LjRoot88	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot88.fna.gz	LjRoot88.faa.gz	LjRoot88.ffn.gz	LjRoot88.gff.gz
LjRoot9	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Bradyrhizobiaceae	Lotus japonicus	Root	LjRoot9.fna.gz	LjRoot9.faa.gz	LjRoot9.ffn.gz	LjRoot9.gff.gz
LjRoot90	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Bradyrhizobiaceae	Lotus japonicus	Root	LjRoot90.fna.gz	LjRoot90.faa.gz	LjRoot90.ffn.gz	LjRoot90.gff.gz
LjRoot91	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Oxalobacteraceae	Lotus japonicus	Root	LjRoot91.fna.gz	LjRoot91.faa.gz	LjRoot91.ffn.gz	LjRoot91.gff.gz
LjRoot92	LjSPHERE	Proteobacteria	Gammaproteobacteria	Pseudomonadales	Pseudomonadaceae	Lotus japonicus	Root	LjRoot92.fna.gz	LjRoot92.faa.gz	LjRoot92.ffn.gz	LjRoot92.gff.gz
LjRoot93	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot93.fna.gz	LjRoot93.faa.gz	LjRoot93.ffn.gz	LjRoot93.gff.gz
LjRoot94	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot94.fna.gz	LjRoot94.faa.gz	LjRoot94.ffn.gz	LjRoot94.gff.gz
LjRoot95	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot95.fna.gz	LjRoot95.faa.gz	LjRoot95.ffn.gz	LjRoot95.gff.gz
LjRoot96	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot96.fna.gz	LjRoot96.faa.gz	LjRoot96.ffn.gz	LjRoot96.gff.gz
LjRoot97	LjSPHERE	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Lotus japonicus	Root	LjRoot97.fna.gz	LjRoot97.faa.gz	LjRoot97.ffn.gz	LjRoot97.gff.gz
LjRoot98	LjSPHERE	Proteobacteria	Alphaproteobacteria	Rhizobiales	Rhizobiaceae	Lotus japonicus	Root	LjRoot98.fna.gz	LjRoot98.faa.gz	LjRoot98.ffn.gz	LjRoot98.gff.gz
LjRoot99	LjSPHERE	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Lotus japonicus	Root	LjRoot99.fna.gz	LjRoot99.faa.gz	LjRoot99.ffn.gz	LjRoot99.gff.gz
Macrophomina phaseolina; Macpha1; MPI-SDFR-AT-0080	Endophytes	Ascomycota	Dothideomycetes	Botryosphaeriales	—	Arabidopsis thaliana	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Microdochium trichocladiopsis; Mictri1; MPI-CAGE-CH-0230	Endophytes	Ascomycota	Sordariomycetes	Xylariales	—	Cardamine hirsuta	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Mortierella elongata; Morel_U14_1; MPI-CAGE-AA-0104	Endophytes	Mucoromycota	Mortierellomycetes	Mortierellales	—	Arabis alpina	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Paraphoma chrysanthemicola; Parch1; MPI-GEGE-AT-0034	Endophytes	Ascomycota	Dothideomycetes	Pleosporales	—	Arabidopsis thaliana	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Paraphoma chrysanthemicola; Parchr1; MPI-SDFR-AT-0120	Endophytes	Ascomycota	Dothideomycetes	Pleosporales	—	Arabidopsis thaliana	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Phaeosphaeria sp.; Phapo1; MPI-PUGE-AT-0046c	Endophytes	Ascomycota	Dothideomycetes	Pleosporales	—	Arabidopsis thaliana	—	assemblies	ORFs_AA	ORFs_NT	GFFs
Plectosphaerella cucumerina; Plecuc1; MPI-CAGE-AT-0016	Endophytes	Ascomycota	Sordariomycetes	Glomerellales	—	Arabidopsis thaliana	—	assemblies	ORFs_AA	ORFs_NT	GFFs