| Strain ID | Collection ID | Phylum | Class | Order | Family | Host | Environment | Assemblies | ORFs AA | ORFs NT | GFFs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| LjRoot1 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Lotus japonicus | Root | LjRoot1.fna.gz | LjRoot1.faa.gz | LjRoot1.ffn.gz | LjRoot1.gff.gz |
| LjRoot2 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot2.fna.gz | LjRoot2.faa.gz | LjRoot2.ffn.gz | LjRoot2.gff.gz |
| LjRoot3 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Lotus japonicus | Root | LjRoot3.fna.gz | LjRoot3.faa.gz | LjRoot3.ffn.gz | LjRoot3.gff.gz |
| LjRoot4 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot4.fna.gz | LjRoot4.faa.gz | LjRoot4.ffn.gz | LjRoot4.gff.gz |
| LjRoot5 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot5.fna.gz | LjRoot5.faa.gz | LjRoot5.ffn.gz | LjRoot5.gff.gz |
| LjRoot6 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot6.fna.gz | LjRoot6.faa.gz | LjRoot6.ffn.gz | LjRoot6.gff.gz |
| LjRoot7 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Phyllobacteriaceae | Lotus japonicus | Root | LjRoot7.fna.gz | LjRoot7.faa.gz | LjRoot7.ffn.gz | LjRoot7.gff.gz |
| LjRoot9 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot9.fna.gz | LjRoot9.faa.gz | LjRoot9.ffn.gz | LjRoot9.gff.gz |
| LjRoot10 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot10.fna.gz | LjRoot10.faa.gz | LjRoot10.ffn.gz | LjRoot10.gff.gz |
| LjRoot11 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot11.fna.gz | LjRoot11.faa.gz | LjRoot11.ffn.gz | LjRoot11.gff.gz |
| LjRoot12 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot12.fna.gz | LjRoot12.faa.gz | LjRoot12.ffn.gz | LjRoot12.gff.gz |
| LjRoot13 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Micrococcaceae | Lotus japonicus | Root | LjRoot13.fna.gz | LjRoot13.faa.gz | LjRoot13.ffn.gz | LjRoot13.gff.gz |
| LjRoot15 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot15.fna.gz | LjRoot15.faa.gz | LjRoot15.ffn.gz | LjRoot15.gff.gz |
| LjRoot16 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Hyphomicrobiaceae | Lotus japonicus | Root | LjRoot16.fna.gz | LjRoot16.faa.gz | LjRoot16.ffn.gz | LjRoot16.gff.gz |
| LjRoot17 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Lotus japonicus | Root | LjRoot17.fna.gz | LjRoot17.faa.gz | LjRoot17.ffn.gz | LjRoot17.gff.gz |
| LjRoot18 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot18.fna.gz | LjRoot18.faa.gz | LjRoot18.ffn.gz | LjRoot18.gff.gz |
| LjRoot19 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot19.fna.gz | LjRoot19.faa.gz | LjRoot19.ffn.gz | LjRoot19.gff.gz |
| LjRoot20 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot20.fna.gz | LjRoot20.faa.gz | LjRoot20.ffn.gz | LjRoot20.gff.gz |
| LjRoot21 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Lotus japonicus | Root | LjRoot21.fna.gz | LjRoot21.faa.gz | LjRoot21.ffn.gz | LjRoot21.gff.gz |
| LjRoot22 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot22.fna.gz | LjRoot22.faa.gz | LjRoot22.ffn.gz | LjRoot22.gff.gz |
| LjRoot24 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot24.fna.gz | LjRoot24.faa.gz | LjRoot24.ffn.gz | LjRoot24.gff.gz |
| LjRoot25 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot25.fna.gz | LjRoot25.faa.gz | LjRoot25.ffn.gz | LjRoot25.gff.gz |
| LjRoot26 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot26.fna.gz | LjRoot26.faa.gz | LjRoot26.ffn.gz | LjRoot26.gff.gz |
| LjRoot27 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot27.fna.gz | LjRoot27.faa.gz | LjRoot27.ffn.gz | LjRoot27.gff.gz |
| LjRoot28 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot28.fna.gz | LjRoot28.faa.gz | LjRoot28.ffn.gz | LjRoot28.gff.gz |
| LjRoot29 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot29.fna.gz | LjRoot29.faa.gz | LjRoot29.ffn.gz | LjRoot29.gff.gz |
| LjRoot30 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot30.fna.gz | LjRoot30.faa.gz | LjRoot30.ffn.gz | LjRoot30.gff.gz |
| LjRoot31 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot31.fna.gz | LjRoot31.faa.gz | LjRoot31.ffn.gz | LjRoot31.gff.gz |
| LjRoot32 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot32.fna.gz | LjRoot32.faa.gz | LjRoot32.ffn.gz | LjRoot32.gff.gz |
| LjRoot33 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot33.fna.gz | LjRoot33.faa.gz | LjRoot33.ffn.gz | LjRoot33.gff.gz |
| LjRoot34 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lotus japonicus | Root | LjRoot34.fna.gz | LjRoot34.faa.gz | LjRoot34.ffn.gz | LjRoot34.gff.gz |
| LjRoot35 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot35.fna.gz | LjRoot35.faa.gz | LjRoot35.ffn.gz | LjRoot35.gff.gz |
| LjRoot36 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Lotus japonicus | Root | LjRoot36.fna.gz | LjRoot36.faa.gz | LjRoot36.ffn.gz | LjRoot36.gff.gz |
| LjRoot37 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot37.fna.gz | LjRoot37.faa.gz | LjRoot37.ffn.gz | LjRoot37.gff.gz |
| LjRoot38 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot38.fna.gz | LjRoot38.faa.gz | LjRoot38.ffn.gz | LjRoot38.gff.gz |
| LjRoot39 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot39.fna.gz | LjRoot39.faa.gz | LjRoot39.ffn.gz | LjRoot39.gff.gz |
| LjRoot40 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot40.fna.gz | LjRoot40.faa.gz | LjRoot40.ffn.gz | LjRoot40.gff.gz |
| LjRoot41 | LjSPHERE | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Lotus japonicus | Root | LjRoot41.fna.gz | LjRoot41.faa.gz | LjRoot41.ffn.gz | LjRoot41.gff.gz |
| LjRoot42 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot42.fna.gz | LjRoot42.faa.gz | LjRoot42.ffn.gz | LjRoot42.gff.gz |
| LjRoot43 | LjSPHERE | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Lotus japonicus | Root | LjRoot43.fna.gz | LjRoot43.faa.gz | LjRoot43.ffn.gz | LjRoot43.gff.gz |
| LjRoot44 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot44.fna.gz | LjRoot44.faa.gz | LjRoot44.ffn.gz | LjRoot44.gff.gz |
| LjRoot45 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | Lotus japonicus | Root | LjRoot45.fna.gz | LjRoot45.faa.gz | LjRoot45.ffn.gz | LjRoot45.gff.gz |
| LjRoot46 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot46.fna.gz | LjRoot46.faa.gz | LjRoot46.ffn.gz | LjRoot46.gff.gz |
| LjRoot47 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot47.fna.gz | LjRoot47.faa.gz | LjRoot47.ffn.gz | LjRoot47.gff.gz |
| LjRoot48 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot48.fna.gz | LjRoot48.faa.gz | LjRoot48.ffn.gz | LjRoot48.gff.gz |
| LjRoot49 | LjSPHERE | Actinobacteria | Actinobacteria | Actinomycetales | Intrasporangiaceae | Lotus japonicus | Root | LjRoot49.fna.gz | LjRoot49.faa.gz | LjRoot49.ffn.gz | LjRoot49.gff.gz |
| LjRoot50 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot50.fna.gz | LjRoot50.faa.gz | LjRoot50.ffn.gz | LjRoot50.gff.gz |
| LjRoot51 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Rhizobiaceae | Lotus japonicus | Root | LjRoot51.fna.gz | LjRoot51.faa.gz | LjRoot51.ffn.gz | LjRoot51.gff.gz |
| LjRoot52 | LjSPHERE | Proteobacteria | Alphaproteobacteria | Rhizobiales | Bradyrhizobiaceae | Lotus japonicus | Root | LjRoot52.fna.gz | LjRoot52.faa.gz | LjRoot52.ffn.gz | LjRoot52.gff.gz |
| LjRoot53 | LjSPHERE | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lotus japonicus | Root | LjRoot53.fna.gz | LjRoot53.faa.gz | LjRoot53.ffn.gz | LjRoot53.gff.gz |